Gene VEA_003139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003139 
Symbol 
ID8556872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1711571 
End bp1713454 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content47% 
IMG OID646406234 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_003285764 
Protein GI262393910 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT CATTAAAACA AAAGCTTATT GGCGCAAGCC TTTCTGCTGT TGTTGTGATG 
GCAACAGCAC TTACTTGGTT GTCGGCTGGT CAATTATTTG ATCAGACTCG TTCAGGTGTC
TATTCACGTG CGCAAAGTCT AAGTACTACT GCGTCAGAAG GAATTTCTGA TTGGGTCAAT
ATCCGTAAAG ATATTGCTAC CGCATTCAAC GACTACTCGA CAGAGCAAGA CGTTGTCCCT
TTCCTACAAC AAGCTCGCAA GGCTGGTGGC TTTGATGACA TCTTCCTTGG TACACCAAAT
GGTGATATGT ATCGCTCTCA CCCAGAGCGT AACCGTGCTG ATTACGATCC TCGTACTCGT
CCTTGGTACA AAGATGCTAA CGCCGCAGGT AAGCAGATCA TCACAGCTGC ATATCAAGAT
GCAATCACTA ACGCGCTGCT TGTAACCATT GCTGAGCCAG TAATGAAAAA TGGTCAGTTT
GTTGGTGTTG TTGGTGCAGA TGTACTGATC GATCAGCTTA TCAGCGACGT GATTAACCTA
GATGCAGGTG AAAACGCGCA TGCGATGTTA ATCGATATGA ACGAAGGTAC GTTCCTAGCG
CATCCTGATA AAAGCTTAAC GCTTAAGCCT ATCACCAGTG TTCTAAAAGA CTTTTCAGAA
GAGGCAATCG AGCGCGCTGC AGATGAAGGT CGTATCGAAG ATACGGTAAT CAAAGGCAAA
GAGAAGCTTT ACTACTTTAA TAAAGTACCT GGCACGCATT GGATGTTCGC GATTGAAATG
GATCGCGCAA CGGAAGAAGC AGGGCATGCG GTATTGCTAC GTGACCTATT GATCACTGCA
GTGATGATCA CCATTGTAGT TATTCTTGCG GTATCTTGGT TGGTTGGTTT CTTGTTCCGT
GACTTGAGCC GTGTATCAAA TGCACTTGAG GAAATTGCAT CTGGTGAAGG TGACTTAACG
CAACGACTAG AACCACGTAG TGATGATGAA GTCGGTAAAC TGGCTGAAAA CTTCAACCGC
TTTGTTGGCA ACATGCACAC GATGGTGACC AAGCTTAGCC ACGTATCATC TGCGCTTTCA
GAGCAAGCAC GCACGACGGC ACAGCAAGCT GAAGAGCGCA GTCAGCGTAT CTCTTACCAG
CAAGATGAGA TCAACATGGT TGCGACGGCT GTGAACGAAA TGGCAGCAGC GACACAAGAA
ATTGCAGGTA ATGCAGATAG CACGGCAAGT AACTCAGAGG AAGCGGTTCA AGCTTGTTCA
CACGGTTCTA GCCAAGTGAC TCAGACGCAA GGTTCTATCC AGAACTTGGC GCAAGAAGTT
CAAGTCGCCA CTGATGTGAT TCAAGAGCTA GAAGCACACG GAAATAGCAT CAATACGATT
CTATCAACGA TTCAAGGTAT TGCTGAGCAA ACTAACCTAC TTGCACTTAA CGCGGCAATT
GAAGCGGCAC GTGCAGGTGA ACAAGGCCGT GGCTTTGCTG TGGTTGCGGA TGAAGTTCGC
GTATTGAGCC AACGCACTCA TGCTTCAACG CAAGAGATTC AAGAAACTAT CGAGATGTTA
CAGGGCACAA CAGCGAAAGC GGTTGGCATC ATGGGTGATA GCCGTCGTCT GGCTGACACC
AGTGTTGATG ATGCAAACGC GGCTGCAGCG AGCTTGACGC AAATCCATAC TGCTGTTGAG
CGCATCAGTG ACATGGCAAC GCAGATTGCA TCGGCGGCAG AAGAGCAAGC ATCGGTAACA
ACCGAGATCA CGCGTAATAC TGAAGGCATT CGTGACGTTT CTAACGAGCT GTCGGTAGAA
GCTCATCAAG CAGCAGAACA AGCTGCCCAC CTATCTGAGC TTTCACACGA ATTAGAGCAA
GAGATTCAAC GATTTAAGCT GTAA
 
Protein sequence
MKLSLKQKLI GASLSAVVVM ATALTWLSAG QLFDQTRSGV YSRAQSLSTT ASEGISDWVN 
IRKDIATAFN DYSTEQDVVP FLQQARKAGG FDDIFLGTPN GDMYRSHPER NRADYDPRTR
PWYKDANAAG KQIITAAYQD AITNALLVTI AEPVMKNGQF VGVVGADVLI DQLISDVINL
DAGENAHAML IDMNEGTFLA HPDKSLTLKP ITSVLKDFSE EAIERAADEG RIEDTVIKGK
EKLYYFNKVP GTHWMFAIEM DRATEEAGHA VLLRDLLITA VMITIVVILA VSWLVGFLFR
DLSRVSNALE EIASGEGDLT QRLEPRSDDE VGKLAENFNR FVGNMHTMVT KLSHVSSALS
EQARTTAQQA EERSQRISYQ QDEINMVATA VNEMAAATQE IAGNADSTAS NSEEAVQACS
HGSSQVTQTQ GSIQNLAQEV QVATDVIQEL EAHGNSINTI LSTIQGIAEQ TNLLALNAAI
EAARAGEQGR GFAVVADEVR VLSQRTHAST QEIQETIEML QGTTAKAVGI MGDSRRLADT
SVDDANAAAA SLTQIHTAVE RISDMATQIA SAAEEQASVT TEITRNTEGI RDVSNELSVE
AHQAAEQAAH LSELSHELEQ EIQRFKL