Gene VEA_003139 details

Gene Information

• Locus tag: VEA_003139
• ID: 8556872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1711571
• End bp: 1713454
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 646406234
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_003285764
• Protein GI: 262393910
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.116124
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAT CATTAAAACA AAAGCTTATT GGCGCAAGCC TTTCTGCTGT TGTTGTGATG 
GCAACAGCAC TTACTTGGTT GTCGGCTGGT CAATTATTTG ATCAGACTCG TTCAGGTGTC 
TATTCACGTG CGCAAAGTCT AAGTACTACT GCGTCAGAAG GAATTTCTGA TTGGGTCAAT 
ATCCGTAAAG ATATTGCTAC CGCATTCAAC GACTACTCGA CAGAGCAAGA CGTTGTCCCT 
TTCCTACAAC AAGCTCGCAA GGCTGGTGGC TTTGATGACA TCTTCCTTGG TACACCAAAT 
GGTGATATGT ATCGCTCTCA CCCAGAGCGT AACCGTGCTG ATTACGATCC TCGTACTCGT 
CCTTGGTACA AAGATGCTAA CGCCGCAGGT AAGCAGATCA TCACAGCTGC ATATCAAGAT 
GCAATCACTA ACGCGCTGCT TGTAACCATT GCTGAGCCAG TAATGAAAAA TGGTCAGTTT 
GTTGGTGTTG TTGGTGCAGA TGTACTGATC GATCAGCTTA TCAGCGACGT GATTAACCTA 
GATGCAGGTG AAAACGCGCA TGCGATGTTA ATCGATATGA ACGAAGGTAC GTTCCTAGCG 
CATCCTGATA AAAGCTTAAC GCTTAAGCCT ATCACCAGTG TTCTAAAAGA CTTTTCAGAA 
GAGGCAATCG AGCGCGCTGC AGATGAAGGT CGTATCGAAG ATACGGTAAT CAAAGGCAAA 
GAGAAGCTTT ACTACTTTAA TAAAGTACCT GGCACGCATT GGATGTTCGC GATTGAAATG 
GATCGCGCAA CGGAAGAAGC AGGGCATGCG GTATTGCTAC GTGACCTATT GATCACTGCA 
GTGATGATCA CCATTGTAGT TATTCTTGCG GTATCTTGGT TGGTTGGTTT CTTGTTCCGT 
GACTTGAGCC GTGTATCAAA TGCACTTGAG GAAATTGCAT CTGGTGAAGG TGACTTAACG 
CAACGACTAG AACCACGTAG TGATGATGAA GTCGGTAAAC TGGCTGAAAA CTTCAACCGC 
TTTGTTGGCA ACATGCACAC GATGGTGACC AAGCTTAGCC ACGTATCATC TGCGCTTTCA 
GAGCAAGCAC GCACGACGGC ACAGCAAGCT GAAGAGCGCA GTCAGCGTAT CTCTTACCAG 
CAAGATGAGA TCAACATGGT TGCGACGGCT GTGAACGAAA TGGCAGCAGC GACACAAGAA 
ATTGCAGGTA ATGCAGATAG CACGGCAAGT AACTCAGAGG AAGCGGTTCA AGCTTGTTCA 
CACGGTTCTA GCCAAGTGAC TCAGACGCAA GGTTCTATCC AGAACTTGGC GCAAGAAGTT 
CAAGTCGCCA CTGATGTGAT TCAAGAGCTA GAAGCACACG GAAATAGCAT CAATACGATT 
CTATCAACGA TTCAAGGTAT TGCTGAGCAA ACTAACCTAC TTGCACTTAA CGCGGCAATT 
GAAGCGGCAC GTGCAGGTGA ACAAGGCCGT GGCTTTGCTG TGGTTGCGGA TGAAGTTCGC 
GTATTGAGCC AACGCACTCA TGCTTCAACG CAAGAGATTC AAGAAACTAT CGAGATGTTA 
CAGGGCACAA CAGCGAAAGC GGTTGGCATC ATGGGTGATA GCCGTCGTCT GGCTGACACC 
AGTGTTGATG ATGCAAACGC GGCTGCAGCG AGCTTGACGC AAATCCATAC TGCTGTTGAG 
CGCATCAGTG ACATGGCAAC GCAGATTGCA TCGGCGGCAG AAGAGCAAGC ATCGGTAACA 
ACCGAGATCA CGCGTAATAC TGAAGGCATT CGTGACGTTT CTAACGAGCT GTCGGTAGAA 
GCTCATCAAG CAGCAGAACA AGCTGCCCAC CTATCTGAGC TTTCACACGA ATTAGAGCAA 
GAGATTCAAC GATTTAAGCT GTAA 

 

Protein sequence

MKLSLKQKLI GASLSAVVVM ATALTWLSAG QLFDQTRSGV YSRAQSLSTT ASEGISDWVN 
IRKDIATAFN DYSTEQDVVP FLQQARKAGG FDDIFLGTPN GDMYRSHPER NRADYDPRTR 
PWYKDANAAG KQIITAAYQD AITNALLVTI AEPVMKNGQF VGVVGADVLI DQLISDVINL 
DAGENAHAML IDMNEGTFLA HPDKSLTLKP ITSVLKDFSE EAIERAADEG RIEDTVIKGK 
EKLYYFNKVP GTHWMFAIEM DRATEEAGHA VLLRDLLITA VMITIVVILA VSWLVGFLFR 
DLSRVSNALE EIASGEGDLT QRLEPRSDDE VGKLAENFNR FVGNMHTMVT KLSHVSSALS 
EQARTTAQQA EERSQRISYQ QDEINMVATA VNEMAAATQE IAGNADSTAS NSEEAVQACS 
HGSSQVTQTQ GSIQNLAQEV QVATDVIQEL EAHGNSINTI LSTIQGIAEQ TNLLALNAAI 
EAARAGEQGR GFAVVADEVR VLSQRTHAST QEIQETIEML QGTTAKAVGI MGDSRRLADT 
SVDDANAAAA SLTQIHTAVE RISDMATQIA SAAEEQASVT TEITRNTEGI RDVSNELSVE 
AHQAAEQAAH LSELSHELEQ EIQRFKL