| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0173 |
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| Symbol | |
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| ID | 5134345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 204508 |
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| End bp | 206427 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530496 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215014 |
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| Protein GI | 147672108 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAATTTG ATATGAATGG AGTATTGTTC ATGAGATTGA GTTTAAAGAG AAAAATGGTT
TTCTCTGTGG TCGTGGCGAT TGCCGTGACG GCGGCGGCGT TAGTCGCCGC AGGGTATCAG
ACCTTTGAAA AGGACAGTTG GCGGGCGATT GAAAGTGAAA GTCGCAATAC TTTACAAGCG
CATGCCAAAG GGATTGGTGA CTGGTTTTTG GGCAAGCAGC TCGCGCTTAA AGGGCTACGT
GAAGAAATTG AACGCAATCC GCAGTTAGAG TTAGTCCCTC ATTTAAGACA GACACTGCAG
TCTGGCTCTT TTGGATTGAG TTACTACGGT AATGAGCAGG GCGAAATGTT CCGTCAAGAT
CCGTCACTCA ATACCGCAGA TTATGACCCT CGAGTCCGTG GTTGGTACAA AGAAGCAAAA
GCAGCCGGCA AACCGATCAC GACCGAACCT TACGTGAGCG TCACCATGCA AACCTTAGTT
GTGACCTTGG CAGAGCCTGT TCGCTATCAA GGTCAATTGA TTGGGGTGGC CGCCTCCAAT
CTTGCGTTAG ATAAGCTGAT TAAAGATGTG TTAGCGATTG AAGTGCCCGG AAAAGGTTAC
GCGATTCTGG TGAACCAAAA AGGCAAAATC GTTGCTCACC CAACTCAAGA TTTGATCCTA
AAGCCGACGG AAGAGATGTC GGCTCAACTG ACTATTTCTA AGCTCAATAT CGCGGCCAAA
GACCATTCGC TCTTCCAACT GAGCATGGAC GGGCGAGATA AGGTCTTGAT GGCTGAGGAA
GTGGCGAATA CCGATTGGTT ACTGGTCATG GTGATGGATA AAGGGGTTCT GGAGCAGCCA
CTGAATGACA TGTTGATGGT GCAGATCGGG ATTGGACTAG GTATCTTGCT TGTGATGGCA
CTGCTTACGT CTTGGTTTGT GGCTCGTCAG CTTAATGAGC TCGGTAATAT CGCTAATGCT
CTGGCGGATA TCGCCGAAGG GGATGGCGAT TTGACTCGTC GTTTGGATGT TCGCAGCCAA
GATGAAGTCG GTTTGCTGGC GGATAAGTTC AACAAGTTCG TCGATCGCTT GCATCAAATG
GTAAAAAATG TGCGTGAAGT GTCGGTGGCG CTGACTCAAG GGGCTGACCA CGCGGCCGCC
TCGGCGACTC AAGCCAGCAA ACGCATTCGC ACCCAGCAAG ATGAAATCAC TATGGTCGCG
ACAGCGGTGA CGGAAATGGC GTCGGCGACA GCTGAAATCG CCAGCAATGC CGAAAATACC
GCGAAGAACG CCACTCAATC GGTGCAATTG GGCGAAGATG GCTTTGCGCA AATGCAACAA
AGTAAACAGT CGATTGACCA GCTTGCTCAA GAGTTAACTG GCGCGGTGCG TATCATCAGC
GAGCTTGAAG TGCATGCCAA TGAAATTTCC ACCATCTTGT CGACCATTCG TGGCATCGCT
GAACAGACCA ATTTGCTGGC ATTGAACGCC GCGATTGAAG CGGCGCGTGC CGGAGAGCAA
GGACGCGGTT TTGCGGTGGT TGCGGATGAA GTTCGTGTGC TGTCACAGCG CACCCACGCA
TCGACGGAAG AGATCCAGAC TAAGATTGCT GGCTTGCAGA AAGTCACCAC CACTGCGGTA
TCGGTAATGA CCGAAAGCCA TAAGTTGGTG GAAACCAGTG TCGCGGATGT CAACCAAACC
GGAGCAAGCT TGCAAGCGAT CAGTGAAGCG ATTCAGCAGA TCAGCGATAT GGCGACGCAA
ATCGCTTCAG CGGCGGAAGA GCAATCGTTA GTGACGGCGG ATATCAATGT GAATACTGAA
TCTGTCCGTG AAGTGAGCGA CCAGTTAGCC GAAGAAGCTC AGCAATCCGT GCAGCAGGCG
AAATCACTGC ATGCGATGGC ACAAGAGCTG AATAAGGAGA TTTCACGCTT TAAGCTATAA
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| Protein sequence | MQFDMNGVLF MRLSLKRKMV FSVVVAIAVT AAALVAAGYQ TFEKDSWRAI ESESRNTLQA
HAKGIGDWFL GKQLALKGLR EEIERNPQLE LVPHLRQTLQ SGSFGLSYYG NEQGEMFRQD
PSLNTADYDP RVRGWYKEAK AAGKPITTEP YVSVTMQTLV VTLAEPVRYQ GQLIGVAASN
LALDKLIKDV LAIEVPGKGY AILVNQKGKI VAHPTQDLIL KPTEEMSAQL TISKLNIAAK
DHSLFQLSMD GRDKVLMAEE VANTDWLLVM VMDKGVLEQP LNDMLMVQIG IGLGILLVMA
LLTSWFVARQ LNELGNIANA LADIAEGDGD LTRRLDVRSQ DEVGLLADKF NKFVDRLHQM
VKNVREVSVA LTQGADHAAA SATQASKRIR TQQDEITMVA TAVTEMASAT AEIASNAENT
AKNATQSVQL GEDGFAQMQQ SKQSIDQLAQ ELTGAVRIIS ELEVHANEIS TILSTIRGIA
EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRVLSQRTHA STEEIQTKIA GLQKVTTTAV
SVMTESHKLV ETSVADVNQT GASLQAISEA IQQISDMATQ IASAAEEQSL VTADINVNTE
SVREVSDQLA EEAQQSVQQA KSLHAMAQEL NKEISRFKL
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