Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3522 |
Symbol | |
ID | 4605769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4155111 |
End bp | 4157021 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782943 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_929394 |
Protein GI | 119776654 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAA ACATGCTTAC CATCAAACAA AAGATTTTGC TTACCGTTTC ACTGGCGGTA ATCCTTTCCA CCGTCGCGGT TGGGCTATTG GGGCAGCACA GCGCCAGAGA CGTGGTAGAG CAGCGGATGC TGGGCTCGGA AATGCCTGCC AAAATGCTGA GTATCCGCAA CGAGCTTGAA AAAGACATGG TAAGCCTGCT TAACGCTGCC AAGCAGCTGG CCGACAGCCG TATGTTGGGC AAATGGCTGG AGCAGGGCCG TCCTGCAGAA GATGAGTCCC GAGTGGTGAG CCAGTTGCAG GACGTCGCCA GCCAATACCA GCTGGCACAG GCCTCCTATG CCGACCGTGA AACCGGTGCC TACTACACCC AGAGTGGCTT TTTACGCATT TTGACCCCGG AGCAGGATGG CTGGTTTTTC GATTACCGCA GCAGTGGTGT GCAACAACGT TTGAATGTAT TTACCGAAGC CAACGGTGAT GTGAAGCTGT TTATCAACTA TCAGCAGCTC AATGGTCGCG GCCTTGCGGG GCTGGCCAAG TCGCTGGATG CCATGGTTCA GCGGCTCACG TCTTTTAAGC TGGAAGAATC TGGCTTTGTC TATCTGGTCG ATGCCAAGGG TGAAGTGCAG CTTCACTCAG ATCCTGGCAA AATTCGTAAA GCCACCCTCA ACTCCTTGTA TGGTAAAAGC GGCAGCTTGT TGTCCAGGGC CGATTTCAAC TACATGGAAG TGGAAGTGGA CGGCCAGCCT ATGATGGTGG CCAGCAGCTA TTTGCCCTCC ATCGATTGGT ACCTGGTGGC CCAGGTGCCC GAGGCCGAAG TGTTCGCCCT GCTGGATGAA GCCGCGCTGA AAATTCTATT TTCTACCTTG TTGATTGCGC TCGCCTTTGT GGTGTTGTCT GGCTTTGTGG CGTCCAGTGT CAGTAAGCCT ATCGCCGCCG TGGCACGTAT GTTCCGTGAC ATAGGTGAAG GCGAGGGGGA CTTGCGTCAG CGTTTGCCGG TGCAGGGTGA AGATGAATTG GCGCAGCTGG CCAGTGGCTT TAACAGCTTT ATCAGTAAAA TCCAGGACTC TGTGATTGAA GTGGCCCAAA CCAGCGAGCA GCTCGGCAAA TCGGCCATCG ATGTGTCGCG CCAGGCGCAG CAAACACTGG AAGACAGTCA GGACCAGAAA GATCGCACCA TGCAGGTGGT GACCGCCATC AATGAGATGG GCGCCACTGT GAACGAGATT GCAGCGAATG CAGCCCAGGC AGCTGAAGCG GCCAAGGACG CCGACCGGGC CTCTGGCTCG GGTCAGAAGG TGGTGACCCA GGCTCGGGAT ACCATCAATC AGCTCTCCAA AGATGTGTCT CAGGTGGGTG AAGTAATTGA GTCCCTGGCC ACCCACACCA AGTCCATCGG CAGTATTCTG GACGTGATTC GCGCGATTTC AGAGCAAACC AACCTGTTGG CGCTCAACGC TGCCATTGAG GCGGCCCGTG CAGGGGAAGC CGGTCGTGGA TTTGCCGTGG TGGCCGACGA AGTGCGTAAT CTGGCATCGC GCACAGCAGC CTCCACCGAT GAAGTACAGG TGATGATAGA CAAGCTGCAA TCTGAATCCG CCAGGGCTGT CAATGCCATG TCCCAGAGCC GCAGCCGCTC CCAGGAAGGG GTGTCGGCGG TGGATGAAGC CAGCAATACC CTGAGCGGCA TTTCCGATCA GATTGGGCTT ATCAGCGACA TGAATATTCA GGTGGCCGCC GCGACCGAAG AGCAGTCGAC CGTCGTGGAG GATATTAACC GCAATGTGAC CGAGATTAAC GATATCACCC AGCGCACCGC TGCAACGGCA CAGGCAGCTG CCCGAGCCAG TAAAGATCTT AATGCCCTTG CCACTCGCCT CGATCAGCTG GTGGCCCGCT TTAAGGTGTA A
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Protein sequence | MNLNMLTIKQ KILLTVSLAV ILSTVAVGLL GQHSARDVVE QRMLGSEMPA KMLSIRNELE KDMVSLLNAA KQLADSRMLG KWLEQGRPAE DESRVVSQLQ DVASQYQLAQ ASYADRETGA YYTQSGFLRI LTPEQDGWFF DYRSSGVQQR LNVFTEANGD VKLFINYQQL NGRGLAGLAK SLDAMVQRLT SFKLEESGFV YLVDAKGEVQ LHSDPGKIRK ATLNSLYGKS GSLLSRADFN YMEVEVDGQP MMVASSYLPS IDWYLVAQVP EAEVFALLDE AALKILFSTL LIALAFVVLS GFVASSVSKP IAAVARMFRD IGEGEGDLRQ RLPVQGEDEL AQLASGFNSF ISKIQDSVIE VAQTSEQLGK SAIDVSRQAQ QTLEDSQDQK DRTMQVVTAI NEMGATVNEI AANAAQAAEA AKDADRASGS GQKVVTQARD TINQLSKDVS QVGEVIESLA THTKSIGSIL DVIRAISEQT NLLALNAAIE AARAGEAGRG FAVVADEVRN LASRTAASTD EVQVMIDKLQ SESARAVNAM SQSRSRSQEG VSAVDEASNT LSGISDQIGL ISDMNIQVAA ATEEQSTVVE DINRNVTEIN DITQRTAATA QAAARASKDL NALATRLDQL VARFKV
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