More than 300 homologs were found in PanDaTox collection
for query gene PA14_61300 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_5279  putative chemotaxis transducer  95.65 
 
 
712 aa  1357    Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  100 
 
 
712 aa  1436    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  72.8 
 
 
716 aa  978    Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  68.91 
 
 
713 aa  992    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
699 aa  475  1e-132  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
714 aa  456  1e-127  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  38.96 
 
 
715 aa  456  1e-127  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  40.34 
 
 
688 aa  450  1e-125  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
688 aa  451  1e-125  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
688 aa  448  1.0000000000000001e-124  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  38.5 
 
 
738 aa  446  1.0000000000000001e-124  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  39.92 
 
 
688 aa  447  1.0000000000000001e-124  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  39.64 
 
 
714 aa  447  1.0000000000000001e-124  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  39.51 
 
 
714 aa  444  1e-123  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  38.46 
 
 
714 aa  433  1e-120  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
714 aa  435  1e-120  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
714 aa  432  1e-119  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
714 aa  419  9.999999999999999e-116  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  33.15 
 
 
695 aa  414  1e-114  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  36.64 
 
 
712 aa  383  1e-105  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  35.34 
 
 
716 aa  371  1e-101  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  32.97 
 
 
720 aa  363  8e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
705 aa  337  2.9999999999999997e-91  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1450  methyl-accepting chemotaxis protein  30.97 
 
 
706 aa  324  4e-87  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000571496  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  30.51 
 
 
713 aa  323  8e-87  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  30.82 
 
 
697 aa  322  1.9999999999999998e-86  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  33.82 
 
 
706 aa  315  9.999999999999999e-85  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
706 aa  313  4.999999999999999e-84  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
706 aa  314  4.999999999999999e-84  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
706 aa  314  4.999999999999999e-84  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
706 aa  311  2e-83  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
706 aa  309  1.0000000000000001e-82  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  32.91 
 
 
706 aa  308  2.0000000000000002e-82  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  29.37 
 
 
740 aa  308  2.0000000000000002e-82  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
706 aa  308  2.0000000000000002e-82  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
705 aa  307  5.0000000000000004e-82  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  48.27 
 
 
674 aa  305  1.0000000000000001e-81  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  31.63 
 
 
706 aa  304  4.0000000000000003e-81  Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
705 aa  304  5.000000000000001e-81  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
730 aa  303  6.000000000000001e-81  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
707 aa  301  2e-80  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  53.57 
 
 
637 aa  300  6e-80  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
626 aa  300  6e-80  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0911  chemotaxis sensory transducer  32.58 
 
 
705 aa  299  1e-79  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000403524  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
636 aa  298  2e-79  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
730 aa  299  2e-79  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  29.43 
 
 
779 aa  297  4e-79  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
638 aa  297  5e-79  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009783  VIBHAR_02788  hypothetical protein  33.71 
 
 
698 aa  296  9e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  48.39 
 
 
541 aa  295  2e-78  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  29.87 
 
 
701 aa  291  3e-77  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
622 aa  291  3e-77  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
622 aa  291  3e-77  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_011138  MADE_01109  methyl-accepting chemotaxis protein  31.97 
 
 
743 aa  290  4e-77  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566074  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  28.24 
 
 
731 aa  290  6e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  47.26 
 
 
541 aa  290  7e-77  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
627 aa  290  9e-77  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  29.44 
 
 
741 aa  289  1e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
637 aa  288  2e-76  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  36.38 
 
 
622 aa  288  2.9999999999999996e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  46.4 
 
 
640 aa  287  5e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
640 aa  285  2.0000000000000002e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
552 aa  283  9e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
634 aa  283  1e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  31.31 
 
 
704 aa  281  2e-74  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  45.82 
 
 
629 aa  279  1e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003063  methyl-accepting chemotaxis protein  34.66 
 
 
682 aa  279  2e-73  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  46.01 
 
 
634 aa  277  5e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  42.64 
 
 
645 aa  276  6e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  36.94 
 
 
623 aa  276  9e-73  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  36.57 
 
 
623 aa  276  1.0000000000000001e-72  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  43.72 
 
 
564 aa  273  7e-72  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.05 
 
 
626 aa  273  8.000000000000001e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  45.45 
 
 
634 aa  273  9e-72  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  42.78 
 
 
568 aa  273  1e-71  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
773 aa  272  1e-71  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  27.87 
 
 
778 aa  271  2e-71  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
643 aa  272  2e-71  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
543 aa  269  1e-70  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
552 aa  269  1e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  46.18 
 
 
543 aa  268  2e-70  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  45.63 
 
 
559 aa  267  5.999999999999999e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  37.55 
 
 
652 aa  265  2e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  41.33 
 
 
554 aa  265  2e-69  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
645 aa  265  2e-69  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
554 aa  264  4e-69  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
568 aa  264  4e-69  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
554 aa  263  6.999999999999999e-69  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
554 aa  263  8.999999999999999e-69  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  26.99 
 
 
723 aa  262  1e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
544 aa  262  2e-68  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
544 aa  261  2e-68  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
554 aa  261  2e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  47.48 
 
 
624 aa  261  2e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
560 aa  262  2e-68  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.16 
 
 
554 aa  261  2e-68  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
554 aa  261  3e-68  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  42 
 
 
554 aa  260  6e-68  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.85 
 
 
548 aa  260  8e-68  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
636 aa  260  8e-68  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
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