| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2000 |
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| Symbol | |
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| ID | 5109891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2210486 |
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| End bp | 2212168 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503241 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001187493 |
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| Protein GI | 146307028 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0144557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0324669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGA CATTGAAAGC CAAGGTGATA CTGCTGGCCC TGGTACCGGT AATCCTCTTC
GCCCTGGTGC TCAGCGGCAC GGCGGCCAGC ATCCTGCAGC GTCTGGCCGC GGACGAGGTG
GCCGAGACCC GTGAGCGCCT GCTGCAGGAA AAACGCAGCG AACTCGAGCA CTACATCCAG
ATCGCCCTGG GCGCCGTGCG GGGGCTGTAC GACGGCGCCA GCCAGGGCGA CATGGCCAGT
CGCGAGCAGG CCATCGCCAT TCTCTCGAAG ATCAAGTACG GCGCCGATGG CTACTTCTTC
GGCCACGACT CCAACGTGGT GCGCCTGTTC CGCGGCGACA GTCCGGTGGA CGTGGGCAAG
AGCCTGGCCG ACCGCCGCGA CCCCAATGGT GTGTACATCA ACCGCGAGCT GGTCAACGTG
GCGAAGAACA ACACCTACTT CGTCAACTAT TCCTCGCCGC TGCCGGGCAA CGAGTCGGTG
CTGGTGCCGA AGCTGGCTTA CAGCTACTAC CTGCCGAAGT GGGACATGGC CCTGGGCACG
GCGCTCAATC TCGATGGCAT CGAGGCGCAG ATCGCCGAAG TCGAGGTGGA GATCGAGCGG
CGTATCGGCA CCATCATCAC CAGCATCGTG GTGGTGGCGG CGATTCTGCT GCTGGTCTTC
GGTGTGGTCG GTGTCTGGCT GGGCAACGCC TTCCTGCGTC CGCTGCAGCA GATCAAGGCC
AACCTCGACG ACATCGCTGC GGGCGAGGGC GATCTGACCC GACGCTTGCC GATCGCCAGC
GACGACGAGC TGGGGCAACT GGCCGGCTCC TTCAACCGCT TCGTCGAGAA GGTGCACGGC
CTGGTGCGGC AGATCGTCGA GATGACCGGC CAGCTCACCG AACTGGTCGG CCAGGTCTCC
GAGCAGGCGC AGCGTTCCGA GCAGGCCATG GCGCAGCAGC GCCACGAGAC TGACCAGGTG
GCCACGGCGA TCAACGAAAT GTCGGCAGCC GCCCACGAGG TGGCCAAGAG CGCGCAGAAC
GCCGCCGAGG CGGCGCAGCA GACCGATCAC GAAGGCCAGG CTGCCAAGGG CGTGGTGGAT
GGCAGCATCC AGCGTATCCA CGCACTGGTC GAGGACATTC GCAGCAGCGG CGTGTCGCTC
GACAGCCTGC AGCAGGACGT ACAGTCCATC GTCAGCGTGC TGGACGTGAT CCGCTCCATT
GCCGAGCAGA CCAACCTGCT GGCGCTCAAT GCGGCCATCG AGGCCGCGCG AGCCGGCGAG
GCGGGGCGTG GCTTCGCCGT GGTCGCCGAC GAGGTGCGTG CCCTGGCCAG CCGCACCCAG
CAGAGCACCC AGGAAATCCA GGGCATGATC GACCGCCTGC AGCAGGGCAC CCAGGAGGCG
GTGACCTCCA TGCGCCGCTC CAGCGATGCC GGTGAGGTCA CCAGCGAGCA GGCCAACAAG
GCTGGCGCCT CGCTGGATGC CATCGCCCAC CTGATCGCCA CCATCAACGC GATGAACGCG
CAGATCGCCA GCGCCGCCGA GGAGCAGACG GCAGTGGCCG AAGAGATCAA CCGCAGCGTG
CACCAGATCG CCGTCGCGGT GGACAGCGTC GCCGATGAAA CCCAGCGCGG CGCCCAGACT
GCACGCAGCC TGGCCGGCCT CGGTGAGCGT CTCGGGGCGC TGGTGCGTCA GTTCCGCATC
TGA
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| Protein sequence | MRLTLKAKVI LLALVPVILF ALVLSGTAAS ILQRLAADEV AETRERLLQE KRSELEHYIQ
IALGAVRGLY DGASQGDMAS REQAIAILSK IKYGADGYFF GHDSNVVRLF RGDSPVDVGK
SLADRRDPNG VYINRELVNV AKNNTYFVNY SSPLPGNESV LVPKLAYSYY LPKWDMALGT
ALNLDGIEAQ IAEVEVEIER RIGTIITSIV VVAAILLLVF GVVGVWLGNA FLRPLQQIKA
NLDDIAAGEG DLTRRLPIAS DDELGQLAGS FNRFVEKVHG LVRQIVEMTG QLTELVGQVS
EQAQRSEQAM AQQRHETDQV ATAINEMSAA AHEVAKSAQN AAEAAQQTDH EGQAAKGVVD
GSIQRIHALV EDIRSSGVSL DSLQQDVQSI VSVLDVIRSI AEQTNLLALN AAIEAARAGE
AGRGFAVVAD EVRALASRTQ QSTQEIQGMI DRLQQGTQEA VTSMRRSSDA GEVTSEQANK
AGASLDAIAH LIATINAMNA QIASAAEEQT AVAEEINRSV HQIAVAVDSV ADETQRGAQT
ARSLAGLGER LGALVRQFRI
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