| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1776 |
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| Symbol | |
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| ID | 3367284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2022789 |
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| End bp | 2024420 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652125 |
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| Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
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| Protein accession | YP_234862 |
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| Protein GI | 66045021 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.363817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGC GCAGTTTGTC CATCAGCCGC CGTCTGTGGC TGATTCTTGT CGTTTCAGTA
CTGATGCTCT TCGTCCTTTC GGCGACGCTG CTCAGGCAAC TGCATAATGA CCTGTATCAG
GCCAAGGCCG AGAAAACCAT GCATGTGGTG CAGACGGCCA GCGGCATCCT CTCCTTCTAT
CAAGGGCTTG AAGCCGCCGG CGGCATGACC CGCGAGGCTG CGCAACAGCA AGCCTTGAAA
GAGATAAAGA GCCTGCGTTA CAGCCAGAGC GACTACTTCT GGATCAACGA CCTGCGCCCG
GTGATGATCA TGCACCCCAC CAACGCCAAG CTCGAAGGCC AGGATCTATC GACCATCAAG
GACCCGGACG GCTTTGCGGT GTTCAATGAA ATGGTCACGC TGGTCAAAGC CCAGGGTGCC
GGGATGGTCA ATTATCGCTG GCCCAAGCCC GGTGCCAGCG AGCCGGTGAA AAAGACCTCC
TACGTGCAGC TGTTTCAACC ATGGGGCTGG ATTCTGGGGT CCGGCGTTTA CGTGGATGAC
GTAGCGGCGG AGTTCAAGAC CCAACTGTGG AACGCCGGGA TGTTCATCGC CGGCATCGTG
CTGATCATGG TGTTGCTGCT GGTCACGATC GTGCGCAGCA TTGTGCGCCC TCTCAGAGCG
GCGGTCGGTG CGATGGCCAG CATTGCCAGT GGCGAGAGCG ATCTGACCCG CACGCTGGAA
ACCCACGGCA ATGATGAAAT AACCGAGCTG GGTACGCACT TCAATGCCTT TGTCGCCAAG
CTGCGCAATG TCGTCGGTCA GTTGCAGCAC TCGGCTGTGG CGCTGGGCCA GGCCTCGACC
GATCTGGGCA GCGACGCCGA ACAGGCGCAG AGCCGCAGCG AGCAACAATC GCAACAGATG
GACCTGGTTG CCACTGCGGT CAACGAAGTG ACCTACGGCG TGCAGGACGT GGCCAAGAAC
GCTGAACATG CCGCCAGCGA AATGCGCGAT GCCGAGTCAC AGGCACAGCA GGGTCAAATC
AATATCGATA ACAGCCTGCG CCAGATCGAA CACCTCTCCA GCACCATAGG TCAGGCCGTG
CAAGTGATGC AGAGCCTGGC CAGCGAGAGC ACGCAGATCG GCAGCGTACT GGAAGTGATC
AGTTCGATTG CCGAGCAGAC CAACCTGCTG GCGCTGAACG CCGCCATCGA GGCAGCGCGT
GCCGGCGAAC AGGGCCGCGG CTTTGCCGTA GTGGCCGACG AAGTGCGTCT GCTGGCCCAG
CGCACGCAGA AATCGACCGC AGAAATCCAG TCAATGATCG AACGCCTGCA AAAGCATTCC
GATGCAGCGG TCAAGGTGAT CGGTGACAGC AGCCGCTCTT CGCAGTTGAC CATCGAGCAG
GCCAATCAGG CCGGCCAGAG CCTGACCTCC ATCAGTCAGG CGCTGCGCAA CCTCAACAGC
CTGAATGCAT CGATCGCCAG CGCCACCCTG CAGCAGACGC ACGTGGTGGA TGACATCAAC
CAGAACGTCA CCCAGGCCGC GCAACTGTCC CAGAGCACCG CACTGGCCGC CGAACAATCG
ACTTCGGCCA GTCTGCACCT GCGCGGGTTG AGCGAAGAGT TGAACACCTT GCTGAAGCAG
TTCCGGGTTT AA
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| Protein sequence | MSMRSLSISR RLWLILVVSV LMLFVLSATL LRQLHNDLYQ AKAEKTMHVV QTASGILSFY
QGLEAAGGMT REAAQQQALK EIKSLRYSQS DYFWINDLRP VMIMHPTNAK LEGQDLSTIK
DPDGFAVFNE MVTLVKAQGA GMVNYRWPKP GASEPVKKTS YVQLFQPWGW ILGSGVYVDD
VAAEFKTQLW NAGMFIAGIV LIMVLLLVTI VRSIVRPLRA AVGAMASIAS GESDLTRTLE
THGNDEITEL GTHFNAFVAK LRNVVGQLQH SAVALGQAST DLGSDAEQAQ SRSEQQSQQM
DLVATAVNEV TYGVQDVAKN AEHAASEMRD AESQAQQGQI NIDNSLRQIE HLSSTIGQAV
QVMQSLASES TQIGSVLEVI SSIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRLLAQ
RTQKSTAEIQ SMIERLQKHS DAAVKVIGDS SRSSQLTIEQ ANQAGQSLTS ISQALRNLNS
LNASIASATL QQTHVVDDIN QNVTQAAQLS QSTALAAEQS TSASLHLRGL SEELNTLLKQ
FRV
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