| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4196 |
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| Symbol | |
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| ID | 5664580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5090334 |
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| End bp | 5091992 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238860 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001504041 |
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| Protein GI | 157964007 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.14959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGC TAGCTTCATT TAGTATTAAA CGAAAATTGA TGGCGGTAAT GTTGGTATTT
GGCTTCGCCG GATGTGCGAT TTTAGTTGAT GTGGTGAATA GCACTGCCGC AGTTGAGCAG
CGTTTTAATG AATATGACCA AGCTGCCGTA AGTAGTCAAA AATATCTGTT ATCTATCAAC
CGCGATATGA ATTACGTGTC ACGCTTATCT CGTAGCATCA TGCTAGGCGA TGATTTCAGC
AAAAACTACA AGCTACTCGA AACCCGGATC CAAGATATCT ATAACCATTT TGAAGGATTA
GATACAGCAA TTAGTGCTAT TGATAATGAT GAATCACGAA GTGAGATTCG TCAGTTAGCC
GATTTATCTC AACAAGCGAC AGAGGCATTT TTAGAAGATG GTCGTAATCG TATGTTAGCT
CTTAAATCTG TTGAACGTTC TCCAGAGGTA TTGCAACAGG CTTGGGCTGA GTATCGTGTA
GGCGCTAGCC CGTTTGCTAA TGAGGCTAGA CGTACTTTCA GAGATTTAAC TGAAGCTGAA
GAGGTTTTAC GAGTCTATAT TCAGGCCGAA GCTGCTGGTG CGTTATCTAG CATGCGCTTA
CAGCTATGTG CTATTACACT TGGCTCGTTT GCATTGGCCG GATTGATTTT GTTGTTTGTT
TCACGAACCA TCTTACGTAC CGTCGATAGT ATGCGTTTAT CTATCACTTC CATTGAAGCC
GATTCAGATC TTACTCGCAG AATCCACATA ACCTCTCAAG ACGAACTGGG TCAGTTATCA
AGGTCATTTA ATTTGATGTT AGATAAATTC CAAACCAGTT TACAAAGTGT CGCCGAAACT
TCGGCGTCAC TAGCCGAATC ATCTCAAGGT ATGGCAGCAA TTACCGCCGA TTCAGCTAGT
TCTGTGCAAA CACAGCGTGA TGAACTAGAA ATGGTCGCGA CGGCGATGAA TGAGATGACT
GCTACCGTGG TTGAGGTTGC CAAAAATGCT AATGATGCCG CTGATGCTGC TGTGCAAACG
GATACCCAGT CTCAAGCTGG TTTAACCGTG GTGAATAATA CAGTGCAAAC CATTGAAGGC
TTAGCCGTTG GCATTGAAAG AGCATCACAG GTAGTTAAAG ATCTTGAGGA TGACAGCCAT
CAAATTGGTT CAATTTTGGA TGTTATCAAG GGGATTGCTG AGCAAACTAA CTTATTGGCA
TTGAATGCTG CAATTGAGGC TGCACGTGCT GGCGAGCAAG GTCGAGGCTT TGCTGTGGTG
GCCGACGAAG TTAGAACGCT GGCGAGTCGC ACCCAAGAGT CGACAGAAGA AATTCAAAGA
ATGATTGAAA AGTTACAAGG TGGCGCAAAA CTCGCTGCCG ACGCCATGTC AGATAGCCGC
CAATATGTGG ATGACAGCGT TAATCACGCC CGTAGTGCAG GCGAAGTTTT ACAAAGTATT
GCCAAAGCCA TTGCGACGAT TACCGATATG AACACTCAAA TTGCCACCGC AGCTGAGGAG
CAAAGCACGG TATCTGAAGA GATTAATACC AACATCGTCA ATATTAGTAA TGCAGCGGAA
GAAACTGCAG CAGGCACAAT GAGCAGCTCT CAAGAAAGCG AAAACTTAGC CCAAATGGCC
AAGCGCCTGT CGGGATTGGT ACAAGAGTTT AAGATTTAA
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| Protein sequence | MDWLASFSIK RKLMAVMLVF GFAGCAILVD VVNSTAAVEQ RFNEYDQAAV SSQKYLLSIN
RDMNYVSRLS RSIMLGDDFS KNYKLLETRI QDIYNHFEGL DTAISAIDND ESRSEIRQLA
DLSQQATEAF LEDGRNRMLA LKSVERSPEV LQQAWAEYRV GASPFANEAR RTFRDLTEAE
EVLRVYIQAE AAGALSSMRL QLCAITLGSF ALAGLILLFV SRTILRTVDS MRLSITSIEA
DSDLTRRIHI TSQDELGQLS RSFNLMLDKF QTSLQSVAET SASLAESSQG MAAITADSAS
SVQTQRDELE MVATAMNEMT ATVVEVAKNA NDAADAAVQT DTQSQAGLTV VNNTVQTIEG
LAVGIERASQ VVKDLEDDSH QIGSILDVIK GIAEQTNLLA LNAAIEAARA GEQGRGFAVV
ADEVRTLASR TQESTEEIQR MIEKLQGGAK LAADAMSDSR QYVDDSVNHA RSAGEVLQSI
AKAIATITDM NTQIATAAEE QSTVSEEINT NIVNISNAAE ETAAGTMSSS QESENLAQMA
KRLSGLVQEF KI
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