More than 300 homologs were found in PanDaTox collection
for query gene Spea_4196 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  67.21 
 
 
552 aa  712    Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  100 
 
 
552 aa  1105    Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  55.1 
 
 
637 aa  291  3e-77  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  46.58 
 
 
712 aa  285  1.0000000000000001e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  53.04 
 
 
679 aa  285  2.0000000000000002e-75  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  47.11 
 
 
712 aa  284  3.0000000000000004e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
716 aa  280  7e-74  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  46.11 
 
 
541 aa  279  8e-74  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  46.65 
 
 
713 aa  278  3e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
541 aa  275  1.0000000000000001e-72  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  50.16 
 
 
624 aa  275  2.0000000000000002e-72  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
638 aa  275  2.0000000000000002e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  45.76 
 
 
543 aa  270  2.9999999999999997e-71  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
637 aa  270  4e-71  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
541 aa  270  5e-71  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  46.44 
 
 
620 aa  268  2e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
638 aa  266  1e-69  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  45.63 
 
 
620 aa  265  2e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
634 aa  264  2e-69  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
773 aa  265  2e-69  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.29 
 
 
523 aa  263  4e-69  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  42.38 
 
 
634 aa  263  4e-69  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.63 
 
 
634 aa  263  8.999999999999999e-69  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  33.93 
 
 
540 aa  263  8.999999999999999e-69  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  45.13 
 
 
559 aa  261  2e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  44.67 
 
 
541 aa  260  6e-68  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
564 aa  259  7e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  46.33 
 
 
638 aa  259  7e-68  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  46.01 
 
 
638 aa  258  1e-67  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  46.65 
 
 
546 aa  258  1e-67  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  46.01 
 
 
638 aa  258  1e-67  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  44.51 
 
 
620 aa  258  3e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  47.29 
 
 
636 aa  256  6e-67  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  43.64 
 
 
546 aa  256  9e-67  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  46.05 
 
 
672 aa  256  1.0000000000000001e-66  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
568 aa  254  2.0000000000000002e-66  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
438 aa  254  3e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  46.29 
 
 
647 aa  253  4.0000000000000004e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  48.06 
 
 
572 aa  254  4.0000000000000004e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  36.03 
 
 
544 aa  253  6e-66  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  34.84 
 
 
552 aa  253  8.000000000000001e-66  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  34.84 
 
 
552 aa  253  8.000000000000001e-66  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
555 aa  252  1e-65  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  44.86 
 
 
674 aa  252  1e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  44.81 
 
 
647 aa  251  2e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
640 aa  251  2e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  46.74 
 
 
688 aa  250  5e-65  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  36.17 
 
 
545 aa  250  5e-65  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  41.82 
 
 
620 aa  250  6e-65  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
605 aa  249  6e-65  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  44 
 
 
541 aa  249  8e-65  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  42.82 
 
 
621 aa  249  8e-65  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
638 aa  249  8e-65  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
674 aa  249  8e-65  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  46.01 
 
 
647 aa  248  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  45.8 
 
 
638 aa  248  2e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
688 aa  247  4e-64  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  43.36 
 
 
639 aa  247  4e-64  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  42.05 
 
 
642 aa  246  6e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  45.89 
 
 
688 aa  246  6e-64  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  46.67 
 
 
561 aa  246  8e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  37.37 
 
 
545 aa  246  8e-64  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  44.51 
 
 
553 aa  246  9e-64  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  43.38 
 
 
553 aa  246  9e-64  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  46.67 
 
 
561 aa  246  9e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
634 aa  245  9.999999999999999e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  45.89 
 
 
688 aa  245  9.999999999999999e-64  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
560 aa  245  1.9999999999999999e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
541 aa  244  3e-63  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  46.47 
 
 
560 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
638 aa  244  3e-63  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
541 aa  244  3.9999999999999997e-63  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  42.61 
 
 
620 aa  244  3.9999999999999997e-63  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  42.24 
 
 
541 aa  244  3.9999999999999997e-63  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
674 aa  243  5e-63  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  46.13 
 
 
623 aa  243  7e-63  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
541 aa  243  7e-63  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  45.05 
 
 
633 aa  243  7.999999999999999e-63  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
547 aa  243  9e-63  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
573 aa  242  1e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
636 aa  242  1e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  41.78 
 
 
630 aa  241  2e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
541 aa  242  2e-62  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  47.15 
 
 
714 aa  242  2e-62  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.71 
 
 
548 aa  242  2e-62  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
541 aa  241  2.9999999999999997e-62  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  41.41 
 
 
633 aa  240  5e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.88 
 
 
640 aa  240  5e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41.88 
 
 
629 aa  240  5.999999999999999e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
620 aa  239  6.999999999999999e-62  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  44.41 
 
 
619 aa  239  6.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
620 aa  239  6.999999999999999e-62  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
620 aa  239  6.999999999999999e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  42.14 
 
 
541 aa  239  8e-62  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
542 aa  239  9e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
541 aa  239  1e-61  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  39.53 
 
 
653 aa  239  1e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  42.54 
 
 
533 aa  239  1e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
620 aa  238  1e-61  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  43.55 
 
 
714 aa  238  2e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
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