| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2616 |
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| Symbol | |
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| ID | 1184268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2906392 |
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| End bp | 2908293 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393986 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_792425 |
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| Protein GI | 28869806 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00438795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAACA CTCTGAGCAA TATTTCTGTC AGGTCCAAGC TAGCGCTTGG GTTTGCTCTG
GTCATCGTGC TGACGGTGCT GATTGCGCTG ACCGGCTGGA CCGGTATCAC TTCGCTGAGC
GAACGAAGCG AAAGGATTGC CGACATTGGC AAGATGAGCA CCTTGACTCG CGATGTGCGC
ATCGCACGTC TGGCGTACTG GATTAACTAC GATGCCGAAC GTGCCAGCGA TTGGTTGAAG
GCTCTTGAAC GCCTCGAAGC CCACGTCAAG TATGCGCAAG AGGTATTCGA CTCTCCGCTG
AACATACCGC TGGTGAACGC TGCCGCCGAA GCGCTGGTTG AATACCGGGT TCACTATGAC
AACCTGATGC GCGCAACAGC CGCCCGCGAG GCAACCCGTG GAGCGTTTGG CCAGTACGCC
GATGCCGGGG CTGAGGACTT GCAGAAGCTG AACGCCTTCG CCAGGTCGGA CGAGGGCAGC
GCCTCACAGC GCGACGCCAT TGTTCAGGCA ATGACACTGT TTCAGAAAAT GCGTTTCGAT
CTGCGTGGTT ATACCTATTC TTTGAAGGCT GAGAACAGGG CGCCCGCAGA AGCTTCAATG
AGCGCAGTCA TTAACTTTGT CAAAGGCCTG CAAGGCTTCG ACAGTCAGTC TGCAACGATC
AAGCACCTCG TGGATTCCAT GGTCAGTTAC CAGAACACCA TGAATCAATT CACCGCCGCA
CAGGCATCCA TCGATCAGGC TCAGGCGGGT ATCACCAAAG TTATCGGGGT TCTTTTCAAA
TCGGCCGACC AATTGTCTGC CAATCAGGTC AGTCTGCGCA TAGAAGACGT TGATCAGGCC
CGGACGCTGC TCTCGGTATG GTTGGTTGCG GCGCTGATTA TGAGTTTCCT GGCTGCGTGG
GTGATAACCC GCCTGATCGT AGGCCCGTTG CTCGAAACAC TGAAACTGGC CGAACGTGTG
GCTGATGGTG ATCTGACCCA CAACCAGGCG GTTACCCGCA AGGATGAGCT GGGACGCTTG
CAAGGCAGCA TGCTGCGCAT GACCACCAAC CTGCGCGAGC TGATCGGTGG GCTGCGTGAC
GGCGTGACGC AAATTGCCAG CGCTGCCGAG CAGTTGTCGG CAGTGACCGA GCAGACCAGC
GCCGGTGTCA ACAGCCAGAA AAGCGAGACC GATCAGGTGG CGACCGCCAT GCATGAGATG
TCGGCCACCG TTCAGGAAGT CGCGAGAAAC GCCGAGCAGG CATCCCATGC GGCGGTCAAC
GCTTCGAAAG AGGCGCGTGA AGGCGACGGC GTCGTTTCCA AGGCGGTGAC GCAGATCGAG
AAGCTTGCGA CTGAAGTGCA GAACTCCAAA TCCGCCATGG ACGAGCTCAA AAGCGAAAGC
AACAAGATTG GTGGTGTGCT GGACGTCATC AAGGCGGTGG CCGAGCAGAC CAACCTGTTG
GCGCTCAACG CTGCTATCGA AGCAGCGCGC GCCGGGGAAG CCGGGCGAGG TTTCGCGGTG
GTTGCTGACG AAGTGCGAAG CCTGGCGCAG CGCACCCAGA CATCGACAGA AGAAATCGCT
GCGTTGATCA GCGGGCTGCA CAGCCGCACC TCGCACGTGG CGACAATCCT CGACAACAGC
CAGGCGCTAA CCGCCAACAG CGTCGAGCTG ACCCGTAACG CGGGCGTCTC TATCGGTAAT
ATCACCCAGG CGATCTCGAC CATCGAGACG ATGAATCACC AGATTGCTGC GGCGGCTGAA
GAGCAGAGCG CAGTTGCCGA AGAGATCAAC CGCAGCGTGC TGAATGTTCG GGATATTTCC
GAACAGACGG CGTCGGCCAG CGAGCAAACC GCCGCATCGA GCGTTGAACT CGCCCGCCTG
GGTGTTCATT TGCAGAGTAT GGTCAGCCGC TTCAAGGTCT GA
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| Protein sequence | MKNTLSNISV RSKLALGFAL VIVLTVLIAL TGWTGITSLS ERSERIADIG KMSTLTRDVR
IARLAYWINY DAERASDWLK ALERLEAHVK YAQEVFDSPL NIPLVNAAAE ALVEYRVHYD
NLMRATAARE ATRGAFGQYA DAGAEDLQKL NAFARSDEGS ASQRDAIVQA MTLFQKMRFD
LRGYTYSLKA ENRAPAEASM SAVINFVKGL QGFDSQSATI KHLVDSMVSY QNTMNQFTAA
QASIDQAQAG ITKVIGVLFK SADQLSANQV SLRIEDVDQA RTLLSVWLVA ALIMSFLAAW
VITRLIVGPL LETLKLAERV ADGDLTHNQA VTRKDELGRL QGSMLRMTTN LRELIGGLRD
GVTQIASAAE QLSAVTEQTS AGVNSQKSET DQVATAMHEM SATVQEVARN AEQASHAAVN
ASKEAREGDG VVSKAVTQIE KLATEVQNSK SAMDELKSES NKIGGVLDVI KAVAEQTNLL
ALNAAIEAAR AGEAGRGFAV VADEVRSLAQ RTQTSTEEIA ALISGLHSRT SHVATILDNS
QALTANSVEL TRNAGVSIGN ITQAISTIET MNHQIAAAAE EQSAVAEEIN RSVLNVRDIS
EQTASASEQT AASSVELARL GVHLQSMVSR FKV
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