More than 300 homologs were found in PanDaTox collection
for query gene Psyr_2315 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  87.29 
 
 
653 aa  1120    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
653 aa  660    Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  100 
 
 
653 aa  1306    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  34.73 
 
 
666 aa  300  6e-80  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
664 aa  294  3e-78  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
664 aa  293  8e-78  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
664 aa  287  5e-76  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
668 aa  286  9e-76  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
664 aa  285  2.0000000000000002e-75  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  32.9 
 
 
662 aa  280  6e-74  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  30.3 
 
 
664 aa  279  1e-73  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
664 aa  275  2.0000000000000002e-72  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
664 aa  275  3e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  32.15 
 
 
661 aa  273  8.000000000000001e-72  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  31.85 
 
 
662 aa  272  1e-71  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  31.83 
 
 
664 aa  273  1e-71  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
664 aa  270  5e-71  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
672 aa  264  4e-69  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  31.14 
 
 
661 aa  263  6.999999999999999e-69  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  32.52 
 
 
664 aa  263  8e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
543 aa  256  1.0000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
638 aa  254  4.0000000000000004e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.6 
 
 
637 aa  253  5.000000000000001e-66  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  45.27 
 
 
547 aa  252  1e-65  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
541 aa  251  2e-65  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
541 aa  252  2e-65  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
605 aa  251  3e-65  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.48 
 
 
712 aa  246  9.999999999999999e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  34.2 
 
 
542 aa  246  9.999999999999999e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  41.94 
 
 
570 aa  246  9.999999999999999e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  47.42 
 
 
636 aa  245  1.9999999999999999e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
573 aa  245  1.9999999999999999e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  42 
 
 
712 aa  244  1.9999999999999999e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
541 aa  244  5e-63  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
572 aa  242  1e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.05 
 
 
773 aa  242  2e-62  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
541 aa  241  2e-62  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  41.9 
 
 
546 aa  241  2e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
638 aa  242  2e-62  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
552 aa  242  2e-62  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
552 aa  242  2e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.74 
 
 
637 aa  240  6.999999999999999e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  40.06 
 
 
546 aa  239  1e-61  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
555 aa  239  1e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.46 
 
 
713 aa  239  1e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
638 aa  238  3e-61  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
573 aa  238  3e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  41.87 
 
 
673 aa  238  3e-61  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  43.98 
 
 
638 aa  236  9e-61  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
716 aa  236  9e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
540 aa  236  1.0000000000000001e-60  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  44.93 
 
 
647 aa  236  1.0000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
541 aa  235  2.0000000000000002e-60  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
541 aa  235  2.0000000000000002e-60  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
640 aa  235  2.0000000000000002e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  45.98 
 
 
679 aa  235  2.0000000000000002e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  35.68 
 
 
540 aa  234  3e-60  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  41.06 
 
 
425 aa  234  5e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
541 aa  233  7.000000000000001e-60  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  40.27 
 
 
541 aa  233  1e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  41.26 
 
 
541 aa  232  1e-59  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
552 aa  231  2e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  41.29 
 
 
541 aa  231  2e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  46.18 
 
 
624 aa  231  3e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
541 aa  231  4e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
541 aa  231  4e-59  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
544 aa  231  4e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
541 aa  231  4e-59  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  45 
 
 
647 aa  230  5e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  39.61 
 
 
546 aa  229  9e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
674 aa  229  9e-59  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
531 aa  229  1e-58  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_007005  Psyr_2109  histidine kinase, HAMP region: chemotaxis sensory transducer  43.11 
 
 
539 aa  229  1e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.950044  normal  0.0787865 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  41.88 
 
 
634 aa  229  1e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
674 aa  229  1e-58  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  40.29 
 
 
541 aa  228  2e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  41.24 
 
 
541 aa  229  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  46 
 
 
638 aa  229  2e-58  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
541 aa  228  2e-58  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
552 aa  228  3e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  41.11 
 
 
633 aa  228  3e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  41.81 
 
 
541 aa  228  3e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
572 aa  228  3e-58  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.21 
 
 
634 aa  227  4e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
634 aa  227  4e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  41.97 
 
 
672 aa  227  5.0000000000000005e-58  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
658 aa  227  5.0000000000000005e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
540 aa  227  5.0000000000000005e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  42.06 
 
 
714 aa  226  7e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.5 
 
 
619 aa  226  7e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  40.94 
 
 
541 aa  225  2e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  45.22 
 
 
647 aa  224  3e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  34.16 
 
 
675 aa  224  4e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  42.58 
 
 
541 aa  223  6e-57  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  39.45 
 
 
542 aa  223  9e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.52 
 
 
681 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
522 aa  222  9.999999999999999e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
541 aa  223  9.999999999999999e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  40.72 
 
 
675 aa  223  9.999999999999999e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  38.74 
 
 
541 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
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