Gene Spea_2242 details

Gene Information

• Locus tag: Spea_2242
• ID: 5664757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 2717834
• End bp: 2719828
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641236846
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001502097
• Protein GI: 157962063
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGGA CTATCATTGC TAATCTCAGC TTAAAGCAGA AGTTTTTTGT CCTTATCCTA 
CCGCCACTCA TTGCATCAGT CATTTTCGGT GGTCTCTACG CTAAAACCCA ATACCAATTA 
AAGAGCGAGC TTACTGAGGT TTTGGTGTTA AGCGAATTGG CTGTGACCAA CAGTAACTTA 
GTTCATGAAA TCCAAAAAGA GCGAGGCATG AGTGCTGGGT TTATCGGCTC CCAAGGCCAA 
TCGTTTTCTC AGAAACTTCC ACAGCAGCAT GATGCAACGG ACGCTTTGCT TAACAGTTAC 
CAGCAATTTC TTAAAAGCCA TGAACTCCCA ACTGCATTTG CGACACAAAT TGCACGAGTA 
GAAAGCCTGC TTAGCCAGAT CCCCGATATA CGTACTCGTG TTGAAGGTTT ATCTATTTCT 
GTCGCCGAAG AGGTAAAGTT CTACACCCAG GTTAATGCAC TATTACTGAG TATTGTTGAC 
TTGACGGCAA ATAATGCCGC TAACCAAGAG ATAGCTATAA GAGCTGCAGC ATTTTCGGCA 
TATTTGCAAA TGAAGGAGAG AGCAGGCATA GAGCGAGCAG TACTCAGTTC AACTTTTGGC 
AATATGGGGT TTAAAGAAGA TGTCTATCGC CGCTTTGTAA CCTTAGTGGC AGAGCAGGCC 
AGTTATCAAG AGCGTTTCTT AGCCTTAGCC GATGAACAAA GTAAGACAAA CTATCAAGCA 
CTGTTAAATA CCAATGCAGT TAAAGATGTT AACCAGTATA GAAACATCGC TTTTAAGCAG 
ATAACTTCTG AGATTGCAGC GCAGAAAGCT GAATCCTGGT TTCAAACGTC CACCCAACGG 
ATTGAGTTAT TAAGAGAATT TGAACATGCG CTGTCAACCG AGCTTATCAA TGTGACCAAG 
CAGCGTTTAT CGGCGGCCAG CCAAAGTTTT TACATCACAT TATTAGGACT GCTGTTCGGC 
GCAGGGATTG TACTGACTCT CTCTATCTCT GTACTGCGCT ATATTCATGG CAGTGTTGCC 
AACTTGCACA ACAGTGTCAC TCGAGCTAGG GCAAACTTTG ATCTTAGCAT CCGTATTGAT 
CAACAGAGTA AAGATGAATT TGGTGAGTTG GCTCTGGCCT TTAATGACAT GATGTCTGAC 
TTTGAGCGCG TGATTGAACA CGTACGTATT AATTCGACCT CTTTATTGAC TGCTGTCTCT 
CAGATGGAGC AATACTCTAC TCAACTACGT CAAGATGTAG AGCTTGGCCA TGGCGAAGCT 
GAGCAGGTTG CTTCTGCGAT GACAGAGATG AGTGCCACGG TTGCCGAAAT CGCTATCAAT 
GCAGAGCGGG CATCAGAGGC CTCGACTCAG GCGAATATTG AGGCTAAAGA GGGCAATGCC 
GAGGTAGGGC GTACCAGTGA TGCCATTGGT GTACTCGCGG GTGATATTCG TGATTCAGCA 
CAGGCATTGC AGCAACTCGA GCAAGATATT CAAAGCATTG TCACTGTGTC AGATGTGATC 
AGTGGTATTG CCGACCAGAC AAACCTACTG GCTCTTAATG CTGCAATCGA AGCGGCTAGA 
GCCGGAGAGT CAGGCAGAGG ATTTGCCGTC GTCGCCGATG AGGTTCGTGG GCTCGCTCAG 
CGGGCACAAA CGGCAACGGG TGATATTAAA TCCATGACTG AACGTTTACG TAGTGGTGCT 
AACACTGCGG TATTGGCGAT GGAGCGTGGA ACTAAGCAGA CCAACGAAAG TGTTGTAGAA 
GCAAACCGAG CCAGTAGCGA ACTAGATAAA ATAGTCGATC ATATTGGTGT TATCGAGAGT 
ATGAACGAGC AGATCGCAGC ATCGACTCAT GAGCAAACGG CCGTGGCTGA AGAAGTGAAT 
CGAAATGCGC AGAAAATTAG CGAGATCTAT CTGCAAACTC ACAGCGTGGC AGATCAGCTA 
AGCGTTCTAA CTGATAAACT CGTTGAGGAC ACGGCAGAGA TGTCGAAAGA GGTGCAAAAA 
TTCAAGTTAA GTTAA 

 

Protein sequence

MKRTIIANLS LKQKFFVLIL PPLIASVIFG GLYAKTQYQL KSELTEVLVL SELAVTNSNL 
VHEIQKERGM SAGFIGSQGQ SFSQKLPQQH DATDALLNSY QQFLKSHELP TAFATQIARV 
ESLLSQIPDI RTRVEGLSIS VAEEVKFYTQ VNALLLSIVD LTANNAANQE IAIRAAAFSA 
YLQMKERAGI ERAVLSSTFG NMGFKEDVYR RFVTLVAEQA SYQERFLALA DEQSKTNYQA 
LLNTNAVKDV NQYRNIAFKQ ITSEIAAQKA ESWFQTSTQR IELLREFEHA LSTELINVTK 
QRLSAASQSF YITLLGLLFG AGIVLTLSIS VLRYIHGSVA NLHNSVTRAR ANFDLSIRID 
QQSKDEFGEL ALAFNDMMSD FERVIEHVRI NSTSLLTAVS QMEQYSTQLR QDVELGHGEA 
EQVASAMTEM SATVAEIAIN AERASEASTQ ANIEAKEGNA EVGRTSDAIG VLAGDIRDSA 
QALQQLEQDI QSIVTVSDVI SGIADQTNLL ALNAAIEAAR AGESGRGFAV VADEVRGLAQ 
RAQTATGDIK SMTERLRSGA NTAVLAMERG TKQTNESVVE ANRASSELDK IVDHIGVIES 
MNEQIAASTH EQTAVAEEVN RNAQKISEIY LQTHSVADQL SVLTDKLVED TAEMSKEVQK 
FKLS