Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1937 |
Symbol | |
ID | 3521916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1995826 |
End bp | 1997814 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284399 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_268667 |
Protein GI | 71281444 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR01614] pectinesterase inhibitor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0215017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTTA TAGATATATC CTTTAATAAG AAAATTTTTA TTTTATTATT TTTTCCTCTA TTGGGGTTTT TAGGGATCGG ATTAAATGCC ATTGTGTCTT CCCTTTCGAC CAATAATGAA ATGGAACAGC TGAGCAAGTA CACAAAACTG TCTTCTGTGT ATAGTGAACT AGTTCATGAG CTACAAAAAG AAAGAGGAAT GACAGCGGGT TTCCTTGGCT CAAAAGGAGT GAAGTTCGCC TATAAATTAC CAAGCCAGAG ACAAAATACC TCCAGTATTG CGGGGAAACG ATTAGATTAC TGGCAAAATA ATCAATTTGA TAATAAGCAG GTTCAACAAT TAAATGACAA TATTAATCAG CGTTTAAATA TGCTCAATCA AATTAGAAGT AATGTTGACA GTTTATCAAT CCCTATCTCA GATGCATTAG CCTTCTATAC CAAAACCAAT GAATTACTGT TGAGTGTTTC AACAATCATT TCTTCGATTT CTACTGATGC CAAAATCACA AAAGAAACGG TTGCCTATTA TAACTTCCTT CAAGGTAAAG AAAGAGCCGG TATTGAGAGA GCCGTATTAA CGGGTACTTT TGCTTCAGGT AAGTTTAATC CAGGTATGTA CCAGAAATTC ATTCGGTTTC TTTCTGAGCA AAATACGTAT TTTTATAGCT TTAATGCCTT CGCGAGTAAC GAAAATAAAA ATTATTTTAG TCAAAAACAA AATGCCCCTT CAATTAAAGA AGTGATAAAG CTAAGAAAAA TAGCGATAGA TAATGCTACT TCAGAAAACC TTAATGTAGA CGCTTCTTTT TGGTTTGAAC AAGCAACTAA AAGAATTGGC GTGTTAAAAG AGATTGAAGA TGAATTAACA CGTTCATTAT TATTACTCAC CAAAGAAACC CAAGGTAACG CATTCAACTC GTTAATTTAT TACCTAATAT CTTCATTAAT GATTCTTTTG TTAGTTGCTA TTTTTAGCTT CTATATTTTG AAAGAACTAC ATAATCAAGT GACAGATCTT ACTTGCGTTA TGTCAAAAGT CAGTGATGGA AATGATTTAA CCGTTAGAGC CAAATTTACC GGTAAGAGCG AGTTAGGGCT CATTTCTACG GCATTAAATT TAACGCTTGA GAAGTTTGCT GGTGCCATGA GTGAAATTTC TACTTCAAGT ACAATGCTTG CAGCCGCTTC AGAAGAAACA TCACAAACAT GTGAACATAA CTCACGTTCT TTAGTTGAGC AACAAGATGA GATTACGCTT ATTGCTACTG CGATAGAAGA GTTATCAGCA ACGGTTAAAG AAGTTGCAGG AAATACTCAA CTAGCGGCTG ATTCAGCAAA AGAAGCGGAT GAGCAAGCAC AAGGTGGCGC GGGTGTTGTG CAAGAGTCTT ACCACTCAAT TGAACTTCTT GCTGAAGAAA TAAATAATTT AGCGTTGAGA ATAACAAGCC TTCACGAAAG TAGTAACAAT ATAACTAGTG TGGTTGATGT GATTAAATCA GTCGCGGAAC AAACTAATTT ACTAGCCTTA AATGCAGCTA TTGAAGCAGC AAGAGCCGGA GAACAAGGGC GTGGATTTGC AGTTGTTGCT GATGAAGTGA GAACTTTAGC ACAAAGAACT CAACAATCGA CCAGTGAAAT AGAAGGTTTT ATATCGGCGC TACAATCAGA TGCTAACTCA GCCTATAGTG TGATAGAAAA AAGTCAGAAA ATGGCAGTGA GTGCAGTGGA AAATTCTAAA AATGTTGAAC AAACATTAGG CGCTATCACC CATTCAGTCA GTACCATTTT TGCGATGACC GAGCAAGTTG CTGTTGCGGT AGAAGAGCAA GCAATGGTTA CTCAAGATGT CGCTAAAAAT GTTGTGACAA TTGAACATAA ATCAATGGAA TCGGCTACAG GTTCAACTCA AATTACCACT ACAGCCAGAG AACAAGCGAT ATTAGCTGTA ACATTACAAG ATATATCGAC GATATTTAAA ATATCTTAA
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Protein sequence | MRLIDISFNK KIFILLFFPL LGFLGIGLNA IVSSLSTNNE MEQLSKYTKL SSVYSELVHE LQKERGMTAG FLGSKGVKFA YKLPSQRQNT SSIAGKRLDY WQNNQFDNKQ VQQLNDNINQ RLNMLNQIRS NVDSLSIPIS DALAFYTKTN ELLLSVSTII SSISTDAKIT KETVAYYNFL QGKERAGIER AVLTGTFASG KFNPGMYQKF IRFLSEQNTY FYSFNAFASN ENKNYFSQKQ NAPSIKEVIK LRKIAIDNAT SENLNVDASF WFEQATKRIG VLKEIEDELT RSLLLLTKET QGNAFNSLIY YLISSLMILL LVAIFSFYIL KELHNQVTDL TCVMSKVSDG NDLTVRAKFT GKSELGLIST ALNLTLEKFA GAMSEISTSS TMLAAASEET SQTCEHNSRS LVEQQDEITL IATAIEELSA TVKEVAGNTQ LAADSAKEAD EQAQGGAGVV QESYHSIELL AEEINNLALR ITSLHESSNN ITSVVDVIKS VAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAQRT QQSTSEIEGF ISALQSDANS AYSVIEKSQK MAVSAVENSK NVEQTLGAIT HSVSTIFAMT EQVAVAVEEQ AMVTQDVAKN VVTIEHKSME SATGSTQITT TAREQAILAV TLQDISTIFK IS
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