Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48030 |
Symbol | |
ID | 4385544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4275245 |
End bp | 4276870 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326429 |
Product | putative methyl-accepting chemotaxis transducer |
Protein accession | YP_791994 |
Protein GI | 116049203 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.478475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCTTC GTCGTATCGC CATCACCCCA CGCGCCGTCA TCGGCTTCGC CATCCTCGCC TCGCTGCTGG TGGCGCTCGG CCTCTTCGCG CACAACCGCA TGGGTTCGCT GAACCGCGCC GCCAGGGATA TCGGCGAAGT CTGGCTGCCC AGCGTCGAAG CCTCGGCCCA GCTCAGCGGC CTGATGAGCG AACTGCGCCT CGGCGAGATG AACCACGTGC TGCTGCACGA CGCCACGCGC ATGCGCCAGC AGGAACAACG GATGGACGAG GTCATCGCTA CCCTCGCCAG GGTGGAAAGG GAATACCGCC CCTTGCTGGT CCTGGACGAG GAGCGCGCGT TGCTCGACCA GTTCGTCCAG CGCCAGCAGG AATACCTCGA AGGACACGCC GCCCTGCTCG CGCTGTCCCG TGACAACCGT ACCGACGAAG CCAGCGTGCT GATGGGCGGG GCCCAGTTGC AGCGCTACGA GCAGGTGCAG CGGACCCTGA AGCAACTCAT CGCCCTCGAC CGCGAGGCCG CCCGCGCCTC CACCGCCGAA GCCGCCGATG TCTACTCCCG GGCCTCCACC GCGATCCTCG CGGTGCTGCT GGTGGCCCTG GCGGCCAGCG TGACGATCGC CTGGCTGCTA ACCCGCAGCA TCGTCGTGCC GATCCGCCAG GCGGTGTCCT GCGCCGACCG CATCGCGGCC CGCGACCTGA CCGGCGAGAT CGCCAGCGAC GGCGACGACG AGCCGGCGCA ACTGATGAAG GCCATGCGCA GCATGCAGGC CAGCCTGCAC GACACCATCG AGCAGATCGG CGATTCCGCC GCGCTGCTGG CCGCCGCTGC CGAGCAACTG AACGCGGTGA CCGAGGAAGG CAACCGGTCG CTGGCCCGGC AGAACGATGA GATCGAGATG GCCGCCACCG CGGTCAACGA AATGAGCGCG GCGGTCGAGG AGGTCGCGCG CAACGCCAGC TCCACCGCCG AGGCCTCCAG TCTCTCGGAA CGGGCCGCCG GCAACGGCCG CGCACGGGTC GAACAGACCG TCCGCTCGAT CCGTCAGATG AACGCCGAGA TCGGCCAGAC CGCGCGCCTG GTGGAAGGCC TGGCCAGCCA GGCGCAGGAC ATCGGCAAGG TGCTCGACGT GATCCGCGCC ATCGCCGAGC AGACCAACCT CCTCGCCCTC AATGCCGCCA TCGAGGCCGC CCGCGCCGGC GAGCAGGGCC GCGGATTCGC GGTGGTCGCC GACGAAGTGC GCGCCCTCGC CCACCGCACC CAGCAATCGA CCCATGAGAT CGAAGGCATG ATCGCCAGCG TCCGCGAGGG CACCGACACC GCGGTGTCCG CGATGCGCGA GAACGACCAG CGCGCCCGGC AGATGCTCGA CGAGGCCGAG GCCGCCGACC ACGCCCTGGG CGAGATCGCC GAGCACGCCA CGCGGATCAA CGAGCGCACC CTGGTGATCG CCAGCGCTGC CGAGGAGCAG GCCCACGTCG CCCGCGAGGT CGATCGCAAC CTGGTGAACA TCCGCGACGT TGCCGTGCAG ACCACCCAGG GCGCCGAGCA GACCCGCGGC GCCAGCCACG AGCTGTCGCG CCTGGCCAAC GACCTCAAGA GCATGATCGG TCGCTTCGTG GTCTGA
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Protein sequence | MLLRRIAITP RAVIGFAILA SLLVALGLFA HNRMGSLNRA ARDIGEVWLP SVEASAQLSG LMSELRLGEM NHVLLHDATR MRQQEQRMDE VIATLARVER EYRPLLVLDE ERALLDQFVQ RQQEYLEGHA ALLALSRDNR TDEASVLMGG AQLQRYEQVQ RTLKQLIALD REAARASTAE AADVYSRAST AILAVLLVAL AASVTIAWLL TRSIVVPIRQ AVSCADRIAA RDLTGEIASD GDDEPAQLMK AMRSMQASLH DTIEQIGDSA ALLAAAAEQL NAVTEEGNRS LARQNDEIEM AATAVNEMSA AVEEVARNAS STAEASSLSE RAAGNGRARV EQTVRSIRQM NAEIGQTARL VEGLASQAQD IGKVLDVIRA IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRALAHRT QQSTHEIEGM IASVREGTDT AVSAMRENDQ RARQMLDEAE AADHALGEIA EHATRINERT LVIASAAEEQ AHVAREVDRN LVNIRDVAVQ TTQGAEQTRG ASHELSRLAN DLKSMIGRFV V
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