| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0861 |
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| Symbol | |
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| ID | 4278689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1011558 |
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| End bp | 1013186 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638133627 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_749552 |
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| Protein GI | 114562039 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATT TTAAAATTAA ACAAAAAATG CTCATTAGCT CGTTAATTCC ATTAGCTATT
CTCATCATAA TTTGTGGCAT TGCGGTGAAT ATGATGGGGA AAATCGAAGA TGGAGTGATG
AGGATCTATT CTGATCGCGT TGTACCGTTA GAAGATTTAA AAATCATTGG TGATGACTAT
GCTGTCTTAG TCATTGATGC AATAAACAAA GCCAATGCTG GTGGCTCAAC CGCTCAAGAT
GCTGCTGAGA CATTAATGAG TGCAAAAAGT AATATTGATA CACTGTGGAA AAAATATTTA
GCCACTAAGT TAACCCCAAA AGAAAGCCAA CTTAGTATTG AAGCCAATGA TATGTTTGGC
CCCGCAGATG AGCAAATTGA TTTTCTTATC AGTAAACTGC AAAACATGTC TGGAAAAATC
CCAGGTCAAT TGACCGATGA CATTATGCCT TTATACGGGG TAATCGATCC TATTAGCGGT
AAAATTGCCG AATTAGTGTC ATTGCAAATA AAAGTAGCAG GCGATGAATG GCGATTAACT
CAAGAGATAT ATCAATCATC AGTTCAGTTA TTTATTTTCT TTACGTTTTG TGCTGTGGTT
ATCAGTGTAG TGTTAACCAT TTGGGTACTG CGTAGTGTGA TGAGGCCAGT GACAGATATT
TTGATGAAAC TAAAGCTCAT TAAGCAAAAC TCAGATTTAA CCCAAGTGTT TACTCCTTAT
AATGATGATG AATTAGGCAT GATTTCAACG AGCCTTACAG GCGTTATAAC TCATCTAAGA
GGCATTATTG AATCAATTTC AGATGCCGCA AATACTATCA ATATTTCATC AGAAGAGTTG
CAGCGTTTCA CTGAAGAAAC CAACCATAGA ATGATACAGC AGCAAGATGA GTCAGAACAA
ACCGCAACGG CTATGAATGA AATGACAGCG ACAGTGGCAG AGGTTGTTCA AAGTACCAAC
TTTGCCGCTG AACAGGCGAA ACAAGCTAAT AATCATGCTG AAAATGGTAA TGTTATTGTT
CAAAATTCAA TAGACAGTAT GTCGCAATTA TCTAACCAAA TTGGCACCAC GGCGGAGGTG
ATATCTCATC TTGCTAAAGA GAGCCAAAAC ATTGGCCAAG TGTTAAGTGT CATTAAAGGC
GTTGCCGAGC AGACTAACCT TTTAGCCTTG AACGCCGCCA TTGAAGCCGC AAGAGCGGGT
GAACAGGGGC GAGGATTTGC TGTTGTTGCA GACGAAGTAC GTACTTTAGC TAAACGTACT
CAAGACTCAA CACTGCAGAT TGAAACCATG ATTGACGGAT TACAAAAAAG TGTCGTACTT
GCGGTTTCTT CAATGGATGA AGGCTTAGCC TTAGTGCATA GTGCCAATGA TAAAACCAAC
AGTGCTGGCA CCGTTCTCAA TGAAATTGTC ACTTCGGTCG ACAGTATCAA TGAACTTAAC
ACTCAAATAG CTACAGCAGC AGAAGAGCAA TCCTATGTAG CTGAGAGTAT CAATAAAAGT
ATCATCACCA TAAATGATAT TACTCAAGCC TCATCCGCAG CGACCGAAAA ACTCACCCAT
TCTGTTAACG ATTTACAATC ACTGGCTAGC TCAATGCAAC TTCAAGTGGC GACATTTAAA
ATAGCCTAA
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| Protein sequence | MLNFKIKQKM LISSLIPLAI LIIICGIAVN MMGKIEDGVM RIYSDRVVPL EDLKIIGDDY
AVLVIDAINK ANAGGSTAQD AAETLMSAKS NIDTLWKKYL ATKLTPKESQ LSIEANDMFG
PADEQIDFLI SKLQNMSGKI PGQLTDDIMP LYGVIDPISG KIAELVSLQI KVAGDEWRLT
QEIYQSSVQL FIFFTFCAVV ISVVLTIWVL RSVMRPVTDI LMKLKLIKQN SDLTQVFTPY
NDDELGMIST SLTGVITHLR GIIESISDAA NTINISSEEL QRFTEETNHR MIQQQDESEQ
TATAMNEMTA TVAEVVQSTN FAAEQAKQAN NHAENGNVIV QNSIDSMSQL SNQIGTTAEV
ISHLAKESQN IGQVLSVIKG VAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAKRT
QDSTLQIETM IDGLQKSVVL AVSSMDEGLA LVHSANDKTN SAGTVLNEIV TSVDSINELN
TQIATAAEEQ SYVAESINKS IITINDITQA SSAATEKLTH SVNDLQSLAS SMQLQVATFK
IA
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