More than 300 homologs were found in PanDaTox collection
for query gene PputW619_2284 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  56.42 
 
 
653 aa  678    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  100 
 
 
653 aa  1294    Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  55.28 
 
 
653 aa  683    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  31.52 
 
 
664 aa  298  2e-79  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  32.09 
 
 
666 aa  291  3e-77  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
664 aa  282  1e-74  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  32.79 
 
 
662 aa  278  2e-73  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  31.8 
 
 
661 aa  278  3e-73  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
668 aa  271  4e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
661 aa  270  5e-71  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  32.22 
 
 
664 aa  268  2.9999999999999995e-70  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  32.75 
 
 
662 aa  264  3e-69  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
543 aa  262  1e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  31.9 
 
 
664 aa  262  2e-68  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
547 aa  260  4e-68  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
664 aa  261  4e-68  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  31.75 
 
 
664 aa  259  1e-67  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
664 aa  259  1e-67  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
664 aa  257  5e-67  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  31.3 
 
 
672 aa  256  1.0000000000000001e-66  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  40.91 
 
 
541 aa  247  4e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
637 aa  246  9.999999999999999e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  43.34 
 
 
638 aa  245  1.9999999999999999e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  45.56 
 
 
541 aa  245  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  29.43 
 
 
605 aa  244  3.9999999999999997e-63  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  29.45 
 
 
664 aa  244  5e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  43.77 
 
 
634 aa  243  6e-63  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
552 aa  243  9e-63  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
552 aa  243  9e-63  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.56 
 
 
712 aa  241  2e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
634 aa  241  2e-62  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  40.26 
 
 
541 aa  241  2.9999999999999997e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  40.88 
 
 
541 aa  241  2.9999999999999997e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  40.55 
 
 
555 aa  240  5e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  43.94 
 
 
573 aa  240  5e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.41 
 
 
637 aa  240  6.999999999999999e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  41.27 
 
 
712 aa  239  8e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
541 aa  239  1e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
573 aa  239  1e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
636 aa  238  4e-61  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  41.62 
 
 
619 aa  237  6e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
688 aa  236  9e-61  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.88 
 
 
640 aa  236  1.0000000000000001e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
541 aa  235  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
541 aa  235  2.0000000000000002e-60  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  41.06 
 
 
542 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
541 aa  234  3e-60  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  45.54 
 
 
638 aa  234  3e-60  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44.15 
 
 
679 aa  234  3e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
714 aa  234  3e-60  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  42.74 
 
 
425 aa  234  3e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
688 aa  234  3e-60  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
541 aa  234  3e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  41.62 
 
 
633 aa  234  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
541 aa  233  7.000000000000001e-60  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
638 aa  233  7.000000000000001e-60  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  31 
 
 
664 aa  233  7.000000000000001e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  40.52 
 
 
714 aa  233  8.000000000000001e-60  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
541 aa  233  1e-59  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
638 aa  233  1e-59  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  42.18 
 
 
541 aa  232  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  46.49 
 
 
638 aa  233  1e-59  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
552 aa  231  2e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
522 aa  232  2e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.97 
 
 
634 aa  230  5e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  43.16 
 
 
688 aa  230  6e-59  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  42.98 
 
 
570 aa  230  7e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
688 aa  230  7e-59  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
552 aa  229  1e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  41.55 
 
 
546 aa  229  1e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  40.06 
 
 
621 aa  228  2e-58  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
541 aa  228  2e-58  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
541 aa  228  3e-58  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  40.3 
 
 
546 aa  228  3e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
541 aa  228  3e-58  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
541 aa  227  5.0000000000000005e-58  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
716 aa  227  6e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  40.53 
 
 
714 aa  227  6e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  45.13 
 
 
541 aa  227  7e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  40.53 
 
 
714 aa  226  8e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  42.66 
 
 
541 aa  226  1e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
714 aa  226  1e-57  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  37.44 
 
 
541 aa  226  1e-57  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  40.67 
 
 
541 aa  226  1e-57  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
714 aa  226  1e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.58 
 
 
638 aa  226  1e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
670 aa  225  2e-57  Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  40.76 
 
 
640 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  38.76 
 
 
542 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  40.91 
 
 
596 aa  224  4e-57  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
544 aa  224  4.9999999999999996e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  38.57 
 
 
542 aa  224  6e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
620 aa  223  6e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
541 aa  223  7e-57  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  43.27 
 
 
715 aa  223  9e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  42.47 
 
 
541 aa  223  9e-57  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
634 aa  222  9.999999999999999e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  42.86 
 
 
546 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
541 aa  222  9.999999999999999e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
773 aa  223  9.999999999999999e-57  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
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