Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4706 |
Symbol | |
ID | 3370256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5575630 |
End bp | 5577255 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637655073 |
Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
Protein accession | YP_237771 |
Protein GI | 66047930 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGC GAAATATGAA CATCGCGCCT CGAGCGTTTC TTGGATTTGC CATGATCGGC ACCCTCATGC TGATTCTGGG CGTCTTTGCA CTGTCACAGA TGAGCAAGAT CCGCAGCGCC ACCGAGGTGC TGGCCGACAG CAACGTGCCC AGCATCAAGA GCCTCGATCG CTTCGCTGAA GTCAGCATTC GTCTGCGGGT GCTGTCCTAT CGATTGCTGG TCAATCGCGA TCCGGAAACC CAGCAGAAAA CCATCGAGCT GATGGCGATG CGCAACAAGC AGATCACTGA CGCTCAGGCC GTTTACGAGA AGCTGATCAG TACCCCCGAC GAGCGCAACC TCTATAGCCA GTACGTGCAG TTGCTGGGCC AGTATCGCCA GCTTGAAGAC CGCCTGAAAA CGCTGACCCG TGCGAACAAC ATCGACGAAT TGCAGGGCTT GCTCAACAAC GAAATGGTCA GCAACTCCGA CCAGATGAAC GTTGTGCTGC GCAAGCTGGT GGATATCAAT ACGGCGCAGT TGAATGAGGT CAAGGAGCAG GCCTCCATCG AGTATGACTC GGCATTCAAT ATGGTGATCG GACTGCTGAT CGCCGCCACC CTGCTGACCC TCGTGTTTGC CTGGATGCTG ATCAAGAGCA TTACCACACC GATTGCCACC GCACTGCTCG CAGCGGAGAC CATCGCGCAA GGCAACCTGA CCCGGCCGAT CAGTATCGAC GGCACCGATG AAGCCGGTCG TCTGCTGCTG GCCATGAAAA CCATGCAGGA CAAGCTGCGC GATACCTTGC AGGGTATTTC CGGCTCGGCC ACGCAACTGG CTTCGGCAGC CGAAGAACTG AATGCCGTCA CTGACGAAAG CGCACGCGGG CTGGTGCAGC AGAACGACGA AATAGAACAG GCTGCCACTG CGGTCAACCA GATGACCAGC GCCGTGGAAG AAGTGGCGCG CAACGCCACC AGCACCTCGC AGGCATCGCG CAGCGCAGCG ACCTCTGCGG GCGATGGCCG CGACCTGGTT CAGGAAACCG TCAGCGCCAT TGAGCGCATG AGTGGCGACG TGCAAGGCAC CGCCGAGCTG ATCATCAGCC TGGCCAATGA GTCGCGTGAT ATCGGCAAGG TGCTCGACGT GATTCGCGGC CTGGCCGACC AGACCAATCT GCTGGCATTG AACGCCGCCA TCGAAGCAGC GCGGGCCGGT GAAGCAGGAC GTGGCTTTGC CGTCGTCGCC GACGAAGTCC GTGCCCTGGC ACATCGCACC CAGCAATCGA CCAGCGAAAT CGAACGCATG ATCAGCAGCA TTCAGACCGG CACGGAACAG GCCGTCAGCT CGATGCGCAA CAGCACCGAA CGCGCCGAAT CGACGCTGAA CATCGCCAAG GGCGCAGGCC AGGCCCTGAA TACCATCAAC AGCGCCGTGG AAGAGATCAA CGAACGCAAC ATGGTCATCG CCAGCGCCGC CGAAGAACAG GCACAAGTCG CCCGCGAAGT GGACCGCAAC CTGGTCAACA TCCGCGACCT GTCGGCACAA TCCACCAACG GCGCCAACCA GACCAGCGCA GCCAGCACCG AGCTGTCACG CCTGGCAATC GACCTCAACG GCATGGTGGC GCGCTTCGCG CTTTGA
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Protein sequence | MSLRNMNIAP RAFLGFAMIG TLMLILGVFA LSQMSKIRSA TEVLADSNVP SIKSLDRFAE VSIRLRVLSY RLLVNRDPET QQKTIELMAM RNKQITDAQA VYEKLISTPD ERNLYSQYVQ LLGQYRQLED RLKTLTRANN IDELQGLLNN EMVSNSDQMN VVLRKLVDIN TAQLNEVKEQ ASIEYDSAFN MVIGLLIAAT LLTLVFAWML IKSITTPIAT ALLAAETIAQ GNLTRPISID GTDEAGRLLL AMKTMQDKLR DTLQGISGSA TQLASAAEEL NAVTDESARG LVQQNDEIEQ AATAVNQMTS AVEEVARNAT STSQASRSAA TSAGDGRDLV QETVSAIERM SGDVQGTAEL IISLANESRD IGKVLDVIRG LADQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRALAHRT QQSTSEIERM ISSIQTGTEQ AVSSMRNSTE RAESTLNIAK GAGQALNTIN SAVEEINERN MVIASAAEEQ AQVAREVDRN LVNIRDLSAQ STNGANQTSA ASTELSRLAI DLNGMVARFA L
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