| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1249 |
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| Symbol | |
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| ID | 5136677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1320807 |
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| End bp | 1322597 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532707 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001217193 |
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| Protein GI | 147675407 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000483868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA ATCCAATTAT CCAGTTTGGA CCATACTCAA ATCAGTATAA TTTCATTAAC
TTTTTACTTT TTGTCGGGGG ATGGATGATG GTATCCAATC AACATAACAA TGCTCATCGC
ACAATAATAG CGGGCACTAC AAACTCACTG CATAGCGTTG GCCTACGCTT GAAACTGATC
GTGGTGCTGA TCGTGGTTTC CATTCTTTTC TTGGGTTTCA AAGGCTTGAC AGGCATGCAA
AGTGCTTCAG ATTCGATTGA ATCGCTTTAT ACAAAAGGAA TGCAACATAC GATTCGTGCT
GGACGCATAT TGGATGAGTT AGGCAGCGCG CGCAGCCAAC TGCTGTTAGC TTTCCAGCAT
GACCCTTCCT CCAAATACGC GCTGATGCAT GATCATCCGA TCACAATGCA CGTCGAAGGT
ATCCAAACAT CGCTGACCAA TTTGCACCGT ATTGTGGATA ACGAAATATT GGCTACCGTA
TTGGATGTTC AAGAAAAAGC CGTGATCCAA ACCTTGAAAG AAAAGCTGGA TCAAGTCACT
CGTCAAGGAT TTGAACCCGC TCTCCAACAG CTCAAGGCTG AAAAATACGA TGCGGCTAAC
TTAATTCTGC TCCAAGTCAT TAACCCTCTT TATAACGAGA TCAAAAAAGC GGCGGAAGCC
TTTCTCGACA TTCAAACCCA AGAAGGAAAA AATAACTTTT CTGCCTCTCA ACACGAGATT
AACCAATTTA TCTGGATGGT CAGCTTACTG GGTGCTTTTG CCTTGATAGT GACTACCAGC
TTAGCACTAC TGATTGCTAA GCGAGTCAAT AATGCAGTGC ACCACTTAGC CAGTTCTGCC
ACCCATATTG CCGCTGGCGA TCTCACTCAA CGCATCCCCG TCACTGGGAA CGATGAATTT
TCGGATATTG CTAAATACGT CAACCGAATT GTAACGAGCT TTCAAGAAGT CATTAGCAGT
AATCGCCACT CAGTCTCTGC TTTAGCGACG GCTGCCGAGG AAAACGCGGC CGTTGCGATG
CAAACGAAGC AAAACATCGT CGAACAGCAG TCGCAAACAC AGCAAATTGC TGCCGCAATC
CATCAGTTCA CCGCCACCGT ACACGAAGTC GCGCAAAGTG CAGGCCTTGC TGCAGAAGCC
TCTGAAGAAG CAGAACAAGC CGCGATGCAG GGACGCAAGG TCGTTGAGGA AAATATTGCG
ATGATTGAAG GGCTATCCAA CGATTTACAA AAGATGCTTG CCGCCATGCA GTTACTTGCC
AAAGATTCAG AAGACATTGG CAGTGTTGTG GATGTGATTC AGAGTATTTC AGAGCAAACC
AATTTATTGG CGCTGAATGC TGCGATCGAA GCCGCTCGCG CGGGTGAACA AGGACGAGGA
TTTGCAGTCG TCGCCGATGA GGTCAGAACC TTAGCAAGCC GCACCCAAGA ATCGACGAAA
CAGATCCTAC AGACAGTGCA GCGCTTACAG CAGAGCAGTC GAGATTCGGC GAATTTAATT
GAACAAGGGG TTTCTGGAGC ATCAAAAGCC GTTGAAAAAG CACGTTTGGC AGGGACGGCG
CTGTCTCAAA TTACGGCTAA CGTCGATCGT ATCTCGACCA TGAACACGCA AATTGCGACA
GCGTCAGAGG AGCAAAGTGC GGTGACTGAG GAGATCAATA AAAACATCAT CACCATCAGC
GAAATCTCCA ACCAAACCGC GTTGGGAGCA CAACAAAGCT CTGAAGCAAC CTTGGAGCTG
GCAAGACTCG CCGAGAGCAT GCAACAGGAA GTCGCGCGTT ACAATGCCTG A
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| Protein sequence | MKFNPIIQFG PYSNQYNFIN FLLFVGGWMM VSNQHNNAHR TIIAGTTNSL HSVGLRLKLI
VVLIVVSILF LGFKGLTGMQ SASDSIESLY TKGMQHTIRA GRILDELGSA RSQLLLAFQH
DPSSKYALMH DHPITMHVEG IQTSLTNLHR IVDNEILATV LDVQEKAVIQ TLKEKLDQVT
RQGFEPALQQ LKAEKYDAAN LILLQVINPL YNEIKKAAEA FLDIQTQEGK NNFSASQHEI
NQFIWMVSLL GAFALIVTTS LALLIAKRVN NAVHHLASSA THIAAGDLTQ RIPVTGNDEF
SDIAKYVNRI VTSFQEVISS NRHSVSALAT AAEENAAVAM QTKQNIVEQQ SQTQQIAAAI
HQFTATVHEV AQSAGLAAEA SEEAEQAAMQ GRKVVEENIA MIEGLSNDLQ KMLAAMQLLA
KDSEDIGSVV DVIQSISEQT NLLALNAAIE AARAGEQGRG FAVVADEVRT LASRTQESTK
QILQTVQRLQ QSSRDSANLI EQGVSGASKA VEKARLAGTA LSQITANVDR ISTMNTQIAT
ASEEQSAVTE EINKNIITIS EISNQTALGA QQSSEATLEL ARLAESMQQE VARYNA
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