More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A1249 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  100 
 
 
596 aa  1201    Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  55.35 
 
 
573 aa  585  1e-166  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
573 aa  557  1e-157  Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  53.83 
 
 
573 aa  539  9.999999999999999e-153  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  51.58 
 
 
572 aa  531  1e-149  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
543 aa  309  8e-83  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
550 aa  275  2.0000000000000002e-72  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  34.77 
 
 
547 aa  273  6e-72  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
552 aa  272  1e-71  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
552 aa  272  1e-71  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  52.1 
 
 
637 aa  271  4e-71  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
549 aa  268  2e-70  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
572 aa  264  3e-69  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  43.06 
 
 
712 aa  255  2.0000000000000002e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  43.86 
 
 
640 aa  254  3e-66  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  37.59 
 
 
541 aa  253  6e-66  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  45.95 
 
 
716 aa  253  8.000000000000001e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  43.57 
 
 
629 aa  252  1e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  42.77 
 
 
712 aa  252  1e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
541 aa  251  4e-65  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.15 
 
 
636 aa  250  6e-65  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
638 aa  249  8e-65  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  45.86 
 
 
647 aa  248  3e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
647 aa  247  4e-64  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
647 aa  247  4.9999999999999997e-64  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
638 aa  246  6.999999999999999e-64  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  39.24 
 
 
638 aa  245  1.9999999999999999e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  43.73 
 
 
739 aa  244  1.9999999999999999e-63  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
638 aa  244  1.9999999999999999e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  42.4 
 
 
642 aa  243  6e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
647 aa  243  7.999999999999999e-63  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  41.6 
 
 
633 aa  243  1e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.21 
 
 
640 aa  241  2e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
640 aa  241  2e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  46.18 
 
 
647 aa  240  5e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
638 aa  240  5.999999999999999e-62  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
541 aa  240  5.999999999999999e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  45.09 
 
 
679 aa  240  6.999999999999999e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.33 
 
 
639 aa  239  1e-61  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
773 aa  238  2e-61  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  37.91 
 
 
548 aa  238  2e-61  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  41.55 
 
 
642 aa  238  3e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
639 aa  238  3e-61  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  41.71 
 
 
713 aa  238  3e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
645 aa  237  5.0000000000000005e-61  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  40.06 
 
 
546 aa  236  7e-61  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
645 aa  235  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
541 aa  235  2.0000000000000002e-60  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
645 aa  235  2.0000000000000002e-60  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  40.17 
 
 
619 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  39.63 
 
 
640 aa  234  3e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
674 aa  234  4.0000000000000004e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
549 aa  233  5e-60  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
605 aa  234  5e-60  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
639 aa  232  1e-59  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
639 aa  233  1e-59  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  42.63 
 
 
673 aa  232  1e-59  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
637 aa  232  1e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
541 aa  232  2e-59  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.44 
 
 
681 aa  231  2e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
675 aa  232  2e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  43.51 
 
 
541 aa  231  3e-59  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  44.24 
 
 
639 aa  231  3e-59  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  39.24 
 
 
638 aa  231  4e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
653 aa  230  5e-59  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
650 aa  230  5e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
541 aa  230  6e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  39.83 
 
 
645 aa  230  6e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
620 aa  230  7e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
552 aa  229  9e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.87 
 
 
676 aa  229  1e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
620 aa  229  1e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
541 aa  228  2e-58  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
645 aa  228  2e-58  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
541 aa  228  2e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  41.18 
 
 
653 aa  228  3e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  41.18 
 
 
653 aa  227  6e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  37.97 
 
 
541 aa  226  9e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
541 aa  226  9e-58  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  40 
 
 
646 aa  226  9e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  42.24 
 
 
634 aa  225  1e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
673 aa  226  1e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
673 aa  226  1e-57  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
674 aa  225  1e-57  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.69 
 
 
523 aa  225  2e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
673 aa  225  2e-57  Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.5 
 
 
564 aa  225  2e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
638 aa  225  2e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
673 aa  225  2e-57  Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  40.28 
 
 
541 aa  224  3e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  42.9 
 
 
647 aa  224  4.9999999999999996e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
634 aa  224  4.9999999999999996e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  42.98 
 
 
639 aa  223  6e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
674 aa  222  9.999999999999999e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
541 aa  222  9.999999999999999e-57  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
541 aa  222  9.999999999999999e-57  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
542 aa  223  9.999999999999999e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  42.6 
 
 
634 aa  222  1.9999999999999999e-56  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
552 aa  221  3e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
548 aa  220  5e-56  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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