| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1324 |
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| Symbol | |
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| ID | 7317816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1424396 |
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| End bp | 1425967 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616214 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002513396 |
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| Protein GI | 220934497 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.587106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA ACCTGCCCGT GACCGGTAAG GAAATCACCC TTCCCCAGGG ACGGACCCTG
ATCTCCTCCA CGGATCTCAA GGGGAGCATC ACCTACGCCA ACGATACCTT CGTGCGGGTG
AGTGGATTCA GCTGCGAGGA ACTGCTGCAC AAGAACCACA ACGTGGTGCG TCACCCGGAC
ATGCCGCCGG CGGCCTTCGA GGATCTCTGG AAGACGGTAA AATCCGGCAA GGCCTGGATG
GGCATCGTCA AGAACCGCGC GAAGAACGGC GATCACTACT GGGTGGATGC CTACGTCACC
CCGGTGTACG AAAACGGCCA GATCGCCGGC TACGAGTCGG TGCGTGCCAT CCCGCGCCGC
GAGGACATCG GCCGCGCCGA GCGCCTGTAC CAGAAGCTCT GGAAGAGCAA GGTGAACCTG
GCCCGGCGGT TTTATCATGG CGTGATCCCG CGCATGGTGG CCGGTCAGCT GCTGATCCTG
CTGGTGGCTT TCCTGCTCAT CTCCACGGGC TTGGGCCTCG CGGGCACCCT GGGGGTGTTC
GCCGGTGCGG GTGTGCTGTC CGCCGCCCTG GCCGTCTGGC TGCTCAGCCC GGTGACCCGG
GTCGCCGCGC ACGCACGGCA GATCGTCGAC AACCCGGTGA TGGAGGCGGT CTACACGGGC
CGGCGCGGCG AGGCCGCGCA GCTTGAAACG GCGCTGCATT TCCTGGAGGC GCGCCTGCGC
ACGGTGCTTG ACCGTATCAG CGTGAGTGCC GAGGACCTGG AAGCGGCGGG CAAGGAGACC
TCCCGGACCG TGCACGAGAC CGTTCAGGGT ATCGATCGCC AGCGGGGCGA GACCGACCAG
GTGGCCACGG CCATGAACGA GATGAGCGCC ACGGTGCACG AGGTGGCCTC CAACACCGCG
CTCGCCGCCG AATCCGCGCG CCAGGCGGAC AACGAGGCCC ATGCGGGCAA GGCGGTGGTG
CACGACACCG CCCGGGCCAT CGAGGCCCTG GCCTCTGAGG TGGAGCAGAC CGCCCATGCC
ATCGAGAAAC TGGAGAAGGA CAGCGACGAG ATCGGCAAGA TCCTGGACGT GATCCGGGGT
ATCGCCGAGC AGACCAACCT GCTGGCCCTG AACGCCGCCA TCGAGGCGGC CCGGGCCGGC
GAGCAGGGCC GGGGCTTCGC GGTGGTGGCC GACGAGGTGC GCACGCTGGC CAGCAAGACC
CAGGAATCCA CCCACACCAT CCAGGAGATG ATCGAGCGCC TGCAGGCCGG CGCCCATCAG
GCGGTGCAGG TGATGGAGTC CAGCCGCAAC CAGGCCCGCA AGGGCGTGGA GCAGGCGGAA
GAGGCGGGGC AGTCCCTGGA TCGGATCGCC GAGGCGGTGA CCCGCATCAA CGACATGAAC
GCCCAGATCG CCACCGCCGT GGAAGAGCAG AGCGCCGTCG CCGAGGAGAT CAACCGCAAC
GTGGTCAACA TCCGCGACGT GGCGGAGAAC AACAACGAGA TCGCCGGGCG CACCGAGGCG
TCCAGCGAGC GGCTGGTGAG TCTGTCCCGG GATCTGCATG CCCTGGTGCT GCGCTTCGGA
GCCAGCCGAT AA
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| Protein sequence | MKKNLPVTGK EITLPQGRTL ISSTDLKGSI TYANDTFVRV SGFSCEELLH KNHNVVRHPD
MPPAAFEDLW KTVKSGKAWM GIVKNRAKNG DHYWVDAYVT PVYENGQIAG YESVRAIPRR
EDIGRAERLY QKLWKSKVNL ARRFYHGVIP RMVAGQLLIL LVAFLLISTG LGLAGTLGVF
AGAGVLSAAL AVWLLSPVTR VAAHARQIVD NPVMEAVYTG RRGEAAQLET ALHFLEARLR
TVLDRISVSA EDLEAAGKET SRTVHETVQG IDRQRGETDQ VATAMNEMSA TVHEVASNTA
LAAESARQAD NEAHAGKAVV HDTARAIEAL ASEVEQTAHA IEKLEKDSDE IGKILDVIRG
IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLASKT QESTHTIQEM IERLQAGAHQ
AVQVMESSRN QARKGVEQAE EAGQSLDRIA EAVTRINDMN AQIATAVEEQ SAVAEEINRN
VVNIRDVAEN NNEIAGRTEA SSERLVSLSR DLHALVLRFG ASR
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