| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3169 |
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| Symbol | |
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| ID | 5664820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3882417 |
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| End bp | 3884279 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237828 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001503020 |
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| Protein GI | 157962986 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.225635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATTC GTTACAAATT ACTGTTAAGT GCAGGAGTGT CCATCACGGC GCTAGCCGCC
ATGTTTGGCC TTCAAGTTTA TTTTACTCAA GTGCAAACGG AATTAGCACA AGCCTCGCAA
GATATTTCGG AGCTCAAGAA TGAAGTTTTA AGGTTACGTA AAGATGAAAA GGATTTTCTA
GCAAGGAAGG AGCTTAAGTA TGTTGAGCAG CACGGGTCTG ATAACCGAGA AGCTCAAGAT
AAGGTCGTTA AGCTGACCGC TGTGTTTGAA AAATATGAGA TCCCAACAGC GAGTTTAAGT
CTGTTTAGTC AAGAGCTCGG CCGTTATGAA TCAGCCTTTA GCAACGTAGT TAGCCTAAAT
AAGCAGATAG GTCTCACCCC TAAAGCGGGT TTATATGGCA CCTTGCGAAG CGCAGTACAT
CAAGTAGAAA GTTTAGTTGA GCAATATGAT GAACCACAAT TGATGGTGCA GATGCTGCAA
CTTAGGCGCG CCGAGAAAGA CTTTATGCTC AGACGTAGTG AAAGCTATGT GACAAAGTTT
GATAAGAATC TCCAAACCTT TATTAATACA GCGAACGCGT CCCAATTGGC AATACAAGCT
AAGCAGCAGG TGTTGAGTAA TATCCAGCAA TATAATGCTG ATTTCAAAGC CTTGGTGCAA
AAAGAGAAAC TGCTCGGTCT GACTATTTCT GAAGGCGAGC GAGGGAAATT ACGCCAAGCG
GTTGCCAATA CAGACAGTGC GCTTAAGCAG CTCGAATCTT TAGCCTTGAA TGCCATCAGC
GATAAAGAAA GTTCGGCGTT TATCTTTGGC CTTGCGATTG CTGTCCTCAT TGCCCTTGCG
TTAGCAGTGA CAACCTTGAT GATTATCCGC AGTATTATCG ATCCAGTTAA ACGCATTACT
GCTGTGATTA CTCACATTGA GGCCAATAAA GATCTGTCGA TGCGTTGTGA TGCCAGCAGC
GACGACGAGC TTGGCCAAAT AGCCAGACAC TTTAACAGCA TGGTAGAAAG CTTTCAGCAG
CTTATTCATC AAGTGACGCA ATCGGTTGAG ACCATGAACC AGTCTTGCCA AGATCTCTCA
AGTAATGTGG CACGCGCTTC ACAAGGCGCT GAGAGTCAGC TTAATGAAAC CGATATGGTG
GCTACAGCGA TTACTGAGAT GGGGGCGACC ATTGATGAAA TTGCTAAGAA CACAGAACTT
GCCGCCAACA AGGCTAGCAT GACTCACGAC AACGCTCAGA CGGGACAGGT TGGTGTGCAG
CAGACGATTG AAAAAATCGA GCTATTGGCA CAACAGATCA ATGAGTCTGC TGCAGTGGTG
GGCGACCTTG AAAAAGACAG CGAAACTATT GGCAGTGTGC TCGATGTTAT TCGCGGTATT
GCCGAGCAAA CCAATTTACT GGCATTAAAT GCGGCTATCG AAGCGGCAAG AGCGGGAGAG
CAGGGACGGG GCTTTGCGGT TGTCGCCGAT GAGGTTCGAA GTCTTGCGAT GCGAACTCAA
GAGTCGACTG AGGAGATAGC TGCAATCATT CAGACCTTAC AGTCTCGAAC CCACTCTATC
GTAGCCCTGA TGCAATCGAG TCGTGAGCAG GGCAACGAGA GTGCTGAACA AGCCGCTTCT
GCTGGGACTC TACTCGAGCA GATTAATGTT GACGTGACCA ACATTATGGA TATGAGCACT
CAGATTGCGG CTGCGATTGA AGAGCAAAGT ATGGTTGCGG CCGAGGTTAA TCAAAATGTG
GTGGTGATCC GCGATATCGC TCAGGAGACG GCCGATGTTG CTACGCAAAA CTCCAGTGCC
ACAGAGGAAG TTCGTGAGCG TGCTGAGTTC CTGCAAGATG CGGTAAGTAA ATTTAAGGTT
TAG
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| Protein sequence | MLIRYKLLLS AGVSITALAA MFGLQVYFTQ VQTELAQASQ DISELKNEVL RLRKDEKDFL
ARKELKYVEQ HGSDNREAQD KVVKLTAVFE KYEIPTASLS LFSQELGRYE SAFSNVVSLN
KQIGLTPKAG LYGTLRSAVH QVESLVEQYD EPQLMVQMLQ LRRAEKDFML RRSESYVTKF
DKNLQTFINT ANASQLAIQA KQQVLSNIQQ YNADFKALVQ KEKLLGLTIS EGERGKLRQA
VANTDSALKQ LESLALNAIS DKESSAFIFG LAIAVLIALA LAVTTLMIIR SIIDPVKRIT
AVITHIEANK DLSMRCDASS DDELGQIARH FNSMVESFQQ LIHQVTQSVE TMNQSCQDLS
SNVARASQGA ESQLNETDMV ATAITEMGAT IDEIAKNTEL AANKASMTHD NAQTGQVGVQ
QTIEKIELLA QQINESAAVV GDLEKDSETI GSVLDVIRGI AEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRSLAMRTQ ESTEEIAAII QTLQSRTHSI VALMQSSREQ GNESAEQAAS
AGTLLEQINV DVTNIMDMST QIAAAIEEQS MVAAEVNQNV VVIRDIAQET ADVATQNSSA
TEEVRERAEF LQDAVSKFKV
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