Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2607 |
Symbol | |
ID | 4606017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3121171 |
End bp | 3122796 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639782018 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_928479 |
Protein GI | 119775739 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00122932 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGT TGCAAATTAA ACACAAGATG CTGCTGGGAT TTTTTATTCC GGTATTGCTG CTCATCATCG TTTGCGGCGT CTCCATGAGT ATCATGTCGA AAATAGAAGA TGGTGTGCTT CGCATCTATA ACGACAGAGT CGTTCCTCTG GAAGATCTCA AGCTTATTGG TGATGACTAT GCCGTTTCTG TCATCGATGC CATCAATAAA GCCAATGCCG GAGGCTTTTC GGCGGAAGAG GCCAGAAATG GTCTGATAGA AGCTAAAAAG AATATAGCCA GCCGCTGGGA CAAGTATATG TCCACAGAAC TCACCGCTGA CGAGCAAAAA CTGGCCAGCC AAACCCAGCA GTTATTTGCA CCTGCCAATC AGCAGATCCA ACTATTGATT GATAAACTCA GTGGCAAGTC AGGCAGTGTG ACCGGACAAT TCAGTGCGGA TATTATCCCG CTTTACCAGG TAATAGACCC CATCAGCGGC AAAGTCGCCG AGCTCGTCAC TCTGCAAATC CATATCGCTG ATCTGGAGCG GGAACAGGTA GAAACATTAC ATTCGAGCTC ACTCAAATGG TTTATCGGGC TGGCCGTCTT TGCCGTTCTC ATCACCAGTT TTTTCGGTGT CTGGGTCAAT CGAGGAGTAA TGACACCCGT AACCGAAATT CGCCAAAAGC TTAGGCAGAT TCGGGAAAAA TCCGATATGA CAGTCAGCTT TACCGTATTC CGCGATGATG AGCTGGGCCA TATCGCAAAA GATCTGAATG GCGTGGTGAA CCACCTCAAA GGCATTTTAA AGAACATTGC CGAGGCCGCA TCGACATTGG GTGATTCTGC CGATGAGCTG AATGAGTTTA CACGACAAGC CAATGACCGG ATGTTCAAAC AGCAATCCGA AACCGAACAG ACTGCCACCG CCATGAATGA GATGACTGCC GCCGTTGCCG AGGTAGCCCA AAGCAGCAAC TCAGCAGCAG AATCCGCCAG AAATGCCGAT GAAAGTGCAG CCAGAGGCAA CAGCATAGTA CAGCAGTCCA TCAGCAGCAT GTCGGTGCTC GCGTCACAGA TTCAAGGAAC GGCCGCCGTG ATAGGCGAAC TCGCCACCGA GAGCCAAAAC ATAGGACGGG TTCTGGATGT AATTAAGAGC ATTGCCGAAC AGACCAACCT GCTGGCCCTG AACGCCGCTA TCGAGGCAGC CCGGGCGGGA GAACAAGGAC GAGGATTTGC CGTGGTGGCC GATGAAGTCA GAACCCTGGC GCAGCGTACC AGCGAATCGA CCCGCGAAAT CGAATCTATG ATTGAATCGT TGCAGCAAGG GGTGAAAAGC GCTGTTAACT CCATGGAACA AGGTATTGCC CAGGTAGACA ATGCCAACGA GAGTACCAAC GCCGCCGGCA GCGCACTGCA GGACATAGTG GCGAGTGTCG ATAGTATTAC CCAACTAAAT ACCCACATAG CCACAGCCGC CGACGAGCAA AGCTGCGTCG CAGAAAGCAT CAATCAGAGC ATCATCGCCA TCAGTGACAT AGCCCAGGAA TCGACTCAGG CAGCAAACGA TTTGAGTGAG GCTGTTCATC AACTTGCACA ACTTGCAGGA CACATGCGTA CCCAGGTGGG GACTTTTATT CTTTAG
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Protein sequence | MNQLQIKHKM LLGFFIPVLL LIIVCGVSMS IMSKIEDGVL RIYNDRVVPL EDLKLIGDDY AVSVIDAINK ANAGGFSAEE ARNGLIEAKK NIASRWDKYM STELTADEQK LASQTQQLFA PANQQIQLLI DKLSGKSGSV TGQFSADIIP LYQVIDPISG KVAELVTLQI HIADLEREQV ETLHSSSLKW FIGLAVFAVL ITSFFGVWVN RGVMTPVTEI RQKLRQIREK SDMTVSFTVF RDDELGHIAK DLNGVVNHLK GILKNIAEAA STLGDSADEL NEFTRQANDR MFKQQSETEQ TATAMNEMTA AVAEVAQSSN SAAESARNAD ESAARGNSIV QQSISSMSVL ASQIQGTAAV IGELATESQN IGRVLDVIKS IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAQRT SESTREIESM IESLQQGVKS AVNSMEQGIA QVDNANESTN AAGSALQDIV ASVDSITQLN THIATAADEQ SCVAESINQS IIAISDIAQE STQAANDLSE AVHQLAQLAG HMRTQVGTFI L
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