Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3680 |
Symbol | |
ID | 1185345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4145626 |
End bp | 4147656 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395027 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_793454 |
Protein GI | 28870835 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTATTG TATTGCAAGC TAATTTTTAT CACGCTAACT ATCAAGTTAA CCGAATCAGC GCCGATTTAC GGACATTCCG GAAAATCAAA GGCACACACG TAATGAGCGC AAAATGGTTG GATAACTTGA ACGTCAGCAA GAAGCTCGGG CTGGGCTTCG CCGCTATTTT GCTGGGCGTG CTGACCGTCA CCGCTATCGG TTACTCCAGC ACCAACCTGC TGATCGAGCG TCTGGGCAAG AGTGGCAAGG TCTCCGAGAT CAAGGCTGAC GTCCTGAACG CCCGCATCGC CGCTCAGGCA TATGCCACGG GGCCGAGCGC TGCCGGCGTG CAAACCTACA GCGGCGCGCT GGACACCCTG GGCCGCAGTG TCGATCAGGG GCTTGAGGTG TTCGTCGTAT CGAGCAACCT GGCCAGACTG CGCGACATCA AGGAGCGGGT GACCGGCCTC AAGCAGACGT TCGATCAACT GGTCGGTATC AACCAGAAGA TCGATGACGC ACTCAAGCCG ATCATCAAGG TGTCCGACGA GGTCAGCGCG ACCTTCGAGA ACCTGCTGCA AAAGACCATC GACGATACGT TGCGTGCACC GGACGAAACC GGCATCAAGC AGGTGAAGAT CGCGGGTGAC CTGCGTAACG GCATGACCAA CTTTCGTCTG GTGTTTCGCC GCTACCTGAG TGTGCCGTCC GCCGATAACC GTCAGGCGAC CTACACCTCG GCCGATGCGC TGATTGCCCA GGTGGCAGCG GCTCGCAGCC AGTTGCCCGT CGAAGCCAAC ATCGCCGTAG ATACCGCGCT CAATGCCTTG AAGCAGTATA AGATGCTGAT GTCTTCGATC TCGGAAATGC TCCAGCAAGC CGATCAGGTT CGCGGCAACC TGCAACAGCA ATCCATCGCA ACAGCGGCCG TCGCCGATGA CCTGGCGGCC CAGCAGATTG TCAGCGCCAA AAAGGAACAG AACACCGCTG TGGTGCAGTT GTTAAGTGTT GCGCTGGTGG TGCTACTGAT TGGTATCTTT GCTGCGTTGC TGATCACTCG CCAGATCACC ATTCCGTTGA ACGATACAGT CATCGCCGCG CGCCGGATCG CCGACGGTGA CCTGACTCAG GACTCCAGCA CGACCCGTCA GGACGAGCTG GGCCTGTTGC AGAACACCAT GCAGCACATG ACCGTTTCCC TGCGCGGCCT GATCGGCGGC ATCGGCAACG GTGTCACGCA GATCGCCACA GCCGCCGAGC AGTTGTCGGC TGTCAGCGAA CAGACCAGCG CTGGCGTCAC ACTGCAGAAA AACGAAGTCG ACCAGGTCGC CACGGCCATG AACGAAATGG CCTCTACCGT CCAGGAGGTG GCGCGCAACA CCGAAGACGC TTCGCGGGCG GCCAAACAGG CCAGCGAACG TGCGGCGCAC GGCAGCAGTG TGGTGCAGCA CGCCACGCGG GAAATCGGCC AGTTGGCCGG TGAAGTGAAG CAACTGGGCG AAGCCATGCA GCGCCTGACC GAAGACAGCA GCAAGATCGG CAGCGTGATC GACGTGATCA AGGCAGTCGC CGAGCAGACA AACCTGCTGG CGCTCAACGC CGCCATCGAG GCCGCACGCG CCGGTGAGCA AGGTCGCGGT TTTGCCGTAG TGGCCGACGA AGTCCGCTCG CTGGCCCAGC GCACCCAGAA CTCGACCACT GAAATCGAAG CACTGATCCT GACCTTGCAA CAAGGCACCG GTGCCGCTTC GGGCCTGATG GACGCCAGCC TGCAACGCAC CGAAGGCACC GTGGTACTGG CCCGCCAGGC CGAACAGGCG CTGGTGGATA TCAATCAGTC CATCGGCACG ATTGAACAGA TGAGCCAGCA GATTTCCGCC GCGGCCGAGC AACAGAGCGC CGTGACCGAC GAAATCAACC GCAGCGTGCT CAGCGTGCGC GACATTGCTG ACCAGTCTGC ATCGGCTACC GAGCAGAGCG CCGCCTCGAC GGTAGAGCTG GCCCGCCTGG GCAGTGATCT GCAAAGCATG GTTGCGCGTT TCAAGATTTA A
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Protein sequence | MAIVLQANFY HANYQVNRIS ADLRTFRKIK GTHVMSAKWL DNLNVSKKLG LGFAAILLGV LTVTAIGYSS TNLLIERLGK SGKVSEIKAD VLNARIAAQA YATGPSAAGV QTYSGALDTL GRSVDQGLEV FVVSSNLARL RDIKERVTGL KQTFDQLVGI NQKIDDALKP IIKVSDEVSA TFENLLQKTI DDTLRAPDET GIKQVKIAGD LRNGMTNFRL VFRRYLSVPS ADNRQATYTS ADALIAQVAA ARSQLPVEAN IAVDTALNAL KQYKMLMSSI SEMLQQADQV RGNLQQQSIA TAAVADDLAA QQIVSAKKEQ NTAVVQLLSV ALVVLLIGIF AALLITRQIT IPLNDTVIAA RRIADGDLTQ DSSTTRQDEL GLLQNTMQHM TVSLRGLIGG IGNGVTQIAT AAEQLSAVSE QTSAGVTLQK NEVDQVATAM NEMASTVQEV ARNTEDASRA AKQASERAAH GSSVVQHATR EIGQLAGEVK QLGEAMQRLT EDSSKIGSVI DVIKAVAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRS LAQRTQNSTT EIEALILTLQ QGTGAASGLM DASLQRTEGT VVLARQAEQA LVDINQSIGT IEQMSQQISA AAEQQSAVTD EINRSVLSVR DIADQSASAT EQSAASTVEL ARLGSDLQSM VARFKI
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