Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0580 |
Symbol | |
ID | 7317928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 612009 |
End bp | 614048 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643615465 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002512664 |
Protein GI | 220933765 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCC TGCTGAAACC CGCCACCTGG CTGATGGATC GCTTCCGCTA CCCGGTGAAG TTCGCCCTGA TCTTCGTGCT GGTGCTGTTG CCCCTGCTGC TCCTGAGCAG CCTCACCATC AGCAACATCA ACAGCACCAT TGGATTTCTG CACAGCGAGC GCCAGGGGCT GAGCTACATC CAGTCCGTCC GCCAGCCGAT CGAATTCATG CAGCAGCATC GCGGCATCAT GGCCACGGTG CTGGCTGGCA ACACCGGCGC CCGCACCCAG GCGCAGGAGA TTCGCGACCG GGTTGACCGC GCCCTGGCGG AACTCTCGGA GGTGGATGCC CGCCTGGGTG GACAGCTTGA GACAGGCAAC CGTCTGGCCG AGATCCAGCG CGCCTGGGGC GAGATCAAGT CCGCCAGTGA GAACCTCGCG CCTGCGGAAA GCGTCCGGCG CCATACGGAC CTGATTGCCA TGACCATGGC CCTGATCAGC CACGTGGCCG ACACTTCCAA CATCACCCTG GACCCGGACC TGGACAGTTA TTACCTGGGT GACGCCCTGG TCAATCGCCT GCTGGGCCTC ACCGAGACCA TGGGACAGGC CCGCGCCCTG GGTTCCGGCG CCGCCGCCGC AGGACAACTC AGCCCAGAAC AGCGTGTGCG GCTAGCGGTG CTGAGCAGCA ACATGCGCAG CCTCGACCGC GATCTGCGCT CGGGTCTGGA GGCGGCATTC AACGCCAATC CGACCCTGTC CAGCAGCCTC GGCCGACTGG TCGAGGCTAA CAACCAGGCG GTGGCTGATT TTTCGCGCAT GCTTCAGGAG CAACTCCTGG ATGTGCAGAA CATCACCGTG AGTGGTCCCC AGGTGTTCGA TGCGGGCACC CGTTCCATCA CCGAGACCTA TCGCCTCTAT GACGCCATGG TGCCGGTACT CGACAACCTG TTCACCACCC GCATCCGAAA CCAGACCGCG ACCCGCAACC TGGCACTCGT GGTGGTGGCC GGCGTCCTGT TGCTGGTCGC CTATCTGTTC ATCGGCCTAT ACCTGTCCAT CCACACCAGC GTACAGCGCA TTGGTGATGC CACCCGGCGC ATGGCGGGCG GCGATCTGAC CACCCGGGTG AGCCTGAACG CCCGCGACGA GATGGGGCAG GTGGCACAAC GCTTCAATGA CATGGCCGAG CAGTTCGAGG CGTTGATCCA GCAGATCGTC AGCGCCACCA GCCAGCTGGC CTCCGCCTCG GAGGAAGTGG CCGCGGTGTC CAAGGACAGC GCCCGCAACG TGGACCGTCA GCGCCAGGAG ACCGATCAGG TGGCCACGGC CATGAACGAG ATGACCGCCA CGGTGCAGGA GGTCGCCAGC AACGCCGCCG GTGCCGCCGG TGCCGCCAGC AACACCGACA ACGAGGCCAA GGGCGGACTG CAGGTGGTCA AATCCACCTC CCAGGCCATC ACCGGTCTCG CCAGCGAGGT GGAAAAGGCC GCCGAGGTCA TCAGACGCGT GTCTGCTGAC AGTGAGACGA TCGGCGCGGT GCTGGACGTC ATCAAGGGCA TCGCCGAGCA GACCAATCTG CTGGCGCTGA ATGCCGCCAT CGAGGCGGCC CGCGCAGGGG AACAGGGCCG GGGTTTCGCC GTGGTCGCCG ACGAGGTGCG TACACTCGCC TCGCGCACCC AGCAGTCCAC CCAGGAGATC GAGGAGATGA TCGAGCGTCT GCAAAGCGGC GCCCGGGAGG CGGTCAAGGC GATGGGCGCG AGCCGGGAAC GCGCCCAGCA GGGTGTCGAG CAGGCCAACG AGGCGGCCGA GGCCCTGGAG GCCATCACCC GCGCCGTGGC CACCATCAAC GAGATGAACA CCCAGATCGC CTCGGCGGCG GAGCAGCAGA GTGCCACCAC GGAGCAGATG AACCGCAGCA TCATCAGCAT CAGGGAGATC GCTGAGCAGA CCGCCAGCGG CGCCGAGCAG ACCACCTCAG CCAGCGATGA GCTGGCCCGG CTGGCCGCCG AGCTTCAGTC CCGGGCGGGC AACTTCACCA TCTCTCACCG CCCATCCTGA
|
Protein sequence | METLLKPATW LMDRFRYPVK FALIFVLVLL PLLLLSSLTI SNINSTIGFL HSERQGLSYI QSVRQPIEFM QQHRGIMATV LAGNTGARTQ AQEIRDRVDR ALAELSEVDA RLGGQLETGN RLAEIQRAWG EIKSASENLA PAESVRRHTD LIAMTMALIS HVADTSNITL DPDLDSYYLG DALVNRLLGL TETMGQARAL GSGAAAAGQL SPEQRVRLAV LSSNMRSLDR DLRSGLEAAF NANPTLSSSL GRLVEANNQA VADFSRMLQE QLLDVQNITV SGPQVFDAGT RSITETYRLY DAMVPVLDNL FTTRIRNQTA TRNLALVVVA GVLLLVAYLF IGLYLSIHTS VQRIGDATRR MAGGDLTTRV SLNARDEMGQ VAQRFNDMAE QFEALIQQIV SATSQLASAS EEVAAVSKDS ARNVDRQRQE TDQVATAMNE MTATVQEVAS NAAGAAGAAS NTDNEAKGGL QVVKSTSQAI TGLASEVEKA AEVIRRVSAD SETIGAVLDV IKGIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRTLA SRTQQSTQEI EEMIERLQSG AREAVKAMGA SRERAQQGVE QANEAAEALE AITRAVATIN EMNTQIASAA EQQSATTEQM NRSIISIREI AEQTASGAEQ TTSASDELAR LAAELQSRAG NFTISHRPS
|
| |