Gene Tgr7_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0580 
Symbol 
ID7317928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp612009 
End bp614048 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content66% 
IMG OID643615465 
Productputative methyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002512664 
Protein GI220933765 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCC TGCTGAAACC CGCCACCTGG CTGATGGATC GCTTCCGCTA CCCGGTGAAG 
TTCGCCCTGA TCTTCGTGCT GGTGCTGTTG CCCCTGCTGC TCCTGAGCAG CCTCACCATC
AGCAACATCA ACAGCACCAT TGGATTTCTG CACAGCGAGC GCCAGGGGCT GAGCTACATC
CAGTCCGTCC GCCAGCCGAT CGAATTCATG CAGCAGCATC GCGGCATCAT GGCCACGGTG
CTGGCTGGCA ACACCGGCGC CCGCACCCAG GCGCAGGAGA TTCGCGACCG GGTTGACCGC
GCCCTGGCGG AACTCTCGGA GGTGGATGCC CGCCTGGGTG GACAGCTTGA GACAGGCAAC
CGTCTGGCCG AGATCCAGCG CGCCTGGGGC GAGATCAAGT CCGCCAGTGA GAACCTCGCG
CCTGCGGAAA GCGTCCGGCG CCATACGGAC CTGATTGCCA TGACCATGGC CCTGATCAGC
CACGTGGCCG ACACTTCCAA CATCACCCTG GACCCGGACC TGGACAGTTA TTACCTGGGT
GACGCCCTGG TCAATCGCCT GCTGGGCCTC ACCGAGACCA TGGGACAGGC CCGCGCCCTG
GGTTCCGGCG CCGCCGCCGC AGGACAACTC AGCCCAGAAC AGCGTGTGCG GCTAGCGGTG
CTGAGCAGCA ACATGCGCAG CCTCGACCGC GATCTGCGCT CGGGTCTGGA GGCGGCATTC
AACGCCAATC CGACCCTGTC CAGCAGCCTC GGCCGACTGG TCGAGGCTAA CAACCAGGCG
GTGGCTGATT TTTCGCGCAT GCTTCAGGAG CAACTCCTGG ATGTGCAGAA CATCACCGTG
AGTGGTCCCC AGGTGTTCGA TGCGGGCACC CGTTCCATCA CCGAGACCTA TCGCCTCTAT
GACGCCATGG TGCCGGTACT CGACAACCTG TTCACCACCC GCATCCGAAA CCAGACCGCG
ACCCGCAACC TGGCACTCGT GGTGGTGGCC GGCGTCCTGT TGCTGGTCGC CTATCTGTTC
ATCGGCCTAT ACCTGTCCAT CCACACCAGC GTACAGCGCA TTGGTGATGC CACCCGGCGC
ATGGCGGGCG GCGATCTGAC CACCCGGGTG AGCCTGAACG CCCGCGACGA GATGGGGCAG
GTGGCACAAC GCTTCAATGA CATGGCCGAG CAGTTCGAGG CGTTGATCCA GCAGATCGTC
AGCGCCACCA GCCAGCTGGC CTCCGCCTCG GAGGAAGTGG CCGCGGTGTC CAAGGACAGC
GCCCGCAACG TGGACCGTCA GCGCCAGGAG ACCGATCAGG TGGCCACGGC CATGAACGAG
ATGACCGCCA CGGTGCAGGA GGTCGCCAGC AACGCCGCCG GTGCCGCCGG TGCCGCCAGC
AACACCGACA ACGAGGCCAA GGGCGGACTG CAGGTGGTCA AATCCACCTC CCAGGCCATC
ACCGGTCTCG CCAGCGAGGT GGAAAAGGCC GCCGAGGTCA TCAGACGCGT GTCTGCTGAC
AGTGAGACGA TCGGCGCGGT GCTGGACGTC ATCAAGGGCA TCGCCGAGCA GACCAATCTG
CTGGCGCTGA ATGCCGCCAT CGAGGCGGCC CGCGCAGGGG AACAGGGCCG GGGTTTCGCC
GTGGTCGCCG ACGAGGTGCG TACACTCGCC TCGCGCACCC AGCAGTCCAC CCAGGAGATC
GAGGAGATGA TCGAGCGTCT GCAAAGCGGC GCCCGGGAGG CGGTCAAGGC GATGGGCGCG
AGCCGGGAAC GCGCCCAGCA GGGTGTCGAG CAGGCCAACG AGGCGGCCGA GGCCCTGGAG
GCCATCACCC GCGCCGTGGC CACCATCAAC GAGATGAACA CCCAGATCGC CTCGGCGGCG
GAGCAGCAGA GTGCCACCAC GGAGCAGATG AACCGCAGCA TCATCAGCAT CAGGGAGATC
GCTGAGCAGA CCGCCAGCGG CGCCGAGCAG ACCACCTCAG CCAGCGATGA GCTGGCCCGG
CTGGCCGCCG AGCTTCAGTC CCGGGCGGGC AACTTCACCA TCTCTCACCG CCCATCCTGA
 
Protein sequence
METLLKPATW LMDRFRYPVK FALIFVLVLL PLLLLSSLTI SNINSTIGFL HSERQGLSYI 
QSVRQPIEFM QQHRGIMATV LAGNTGARTQ AQEIRDRVDR ALAELSEVDA RLGGQLETGN
RLAEIQRAWG EIKSASENLA PAESVRRHTD LIAMTMALIS HVADTSNITL DPDLDSYYLG
DALVNRLLGL TETMGQARAL GSGAAAAGQL SPEQRVRLAV LSSNMRSLDR DLRSGLEAAF
NANPTLSSSL GRLVEANNQA VADFSRMLQE QLLDVQNITV SGPQVFDAGT RSITETYRLY
DAMVPVLDNL FTTRIRNQTA TRNLALVVVA GVLLLVAYLF IGLYLSIHTS VQRIGDATRR
MAGGDLTTRV SLNARDEMGQ VAQRFNDMAE QFEALIQQIV SATSQLASAS EEVAAVSKDS
ARNVDRQRQE TDQVATAMNE MTATVQEVAS NAAGAAGAAS NTDNEAKGGL QVVKSTSQAI
TGLASEVEKA AEVIRRVSAD SETIGAVLDV IKGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRTLA SRTQQSTQEI EEMIERLQSG AREAVKAMGA SRERAQQGVE QANEAAEALE
AITRAVATIN EMNTQIASAA EQQSATTEQM NRSIISIREI AEQTASGAEQ TTSASDELAR
LAAELQSRAG NFTISHRPS