Gene PSPA7_5811 details

Gene Information

• Locus tag: PSPA7_5811
• ID: 5356539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 6001351
• End bp: 6003294
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640814856
• Product: putative chemotaxis transducer
• Protein accession: YP_001351130
• Protein GI: 152983757
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGATT GGTGGGTTCT CCAACTGGCC AAGCTGAGCG TCAGCCGCAA GCTGATGCTC 
GGTTTCGGTG TCCTCCTCGC GCTGCTTCTG CTGGTGGTGG TCAGCAGCAA CCGCACCCTC 
ACGCACCAGA CCGCGCTGAG CGAGCAGCTC GCCGAGGTGG CCACGCTCAT GGAACAGGCC 
CAGCAGGCCG AGCAGGCGCA CCTGGCGTTC GACGCCGGCA GCGACCCGCG CGAGGCCGAG 
CGGCTGCGCC GGATACTCAC CGGCATGCTC GAGCGCCTGC GGCAACTGCG CGACAGCGAA 
CTCGACCCGG CCGCCCTGGC CCGTGAGGCC GAGGCGATCG AGGCCTACCG CGGGGCCTTC 
GACGACCTCG CCGCCGCCGA CCAGCAGCGC AGCGCCGCCC GCGGTGTGCT GGTGGGCAGC 
GCGCAACAGG CGCTGGACAG CTTCGCCCGC CTGGAAGAAC TGATGGACGC CAGCCTCGCG 
CAACAGGCCG GCGATCCGCA GGCGCTGCAA CGCAGCCGCG CGGTAGCCGA CCTGCACCAA 
CAACTGCTCA TGGTGCGCTA CCAGGTGCGT GGCTATGTCT TCGAGCGCAG CGACAAGGCC 
GAGCAGGCCG CGTTCGCCGC GTTCGACGCA CTGCGCCAGG CCGGCACGGC GCTACACGGA 
CAGTTGCCGG AGGAGGCCGG TGCGGCGCTG GAACAGGCCA TGCGCAGCCT CCAGGACTAC 
CGTGGCGGCA TCGAGCAGTT CCGCGCCGGC GTCGCTCGCA CGCGCCAGGC GCAGCAGGCG 
ATGCAGAGCA GCACCCAGGA TATGGCCCGG GCCGGCCAGA CCCTCACCGA AGCCGGTCGC 
CAATTGCGCG AAAGCACCGC CAGCCGCGAC CGCGCCAGCC TCTGGCTGAT CGCCGCGCTG 
GCCCTGGCCT TCGGCTGCGT CGCCGGCTGG GCGATCAACC GGCAGATCGT CCGGCCGCTG 
GACGAAGCCC TCGCGCTGGC CGAGGCCATC GCCGCCGGCG ACCTCGGCAA GCGTCCGCAG 
AATCCCCTGA CCCTCCAGCG TCGCGACGAA CTGGGCCAGT TGCAGCGGGT CATGCAGCGC 
ATGGGCGACA GCTTGCGCGA ACTGGTCGGG CAGATCGGCG ACGGTGTCGG CCAACTGGCC 
AGCTCCGCCG AGGAACTCTC GGCGGTCACC GAGCAGGCCC GAGCCGGGGT CAACAGCCAG 
AAGGTCGAGA CCGACCAGGT CGCCACCGCC ATGCACGAGA TGACCGCCAC CGTGCAAGAC 
GTCGCGCGCA ACGCCGAACT GGCTTCCCAG GCCGCTCGCC AGGCCGACGA AGAGGCGCGC 
CAGGGCGACG CGGTGGTCGA CCAGGCGGTG ACCCGCATCG AACGCCTGGC CACCGAGATG 
GACGGCTCCA GCGAAGCCAT GGCGCGCCTG AGGAACGACA GCGAACAGAT CGGCAGCGTC 
CTCGACGTGA TCAAGTCGGT GGCCGAGCAG ACCAACCTGC TGGCGCTCAA CGCCGCCATC 
GAGGCGGCCC GCGCCGGCGA GGCCGGACGC GGCTTCGCCG TGGTCGCCGA CGAGGTGCGC 
GGCCTGGCCC AGCGCACCCA GCACTCCACC GCCGAGATCG AGGGCCTGAT CCAGCGTCTC 
CAGCAGGGCG CCGGCGAGGC CGCCGATCGC CTGGAGAACA GCCGCTCGCT CACCGCCAGC 
ACGGTGGAGC TGGCGCGCCG CGCCGGCGTC GCGCTGGACA GCATCACCCG CACCGTCTCC 
GATATCCAGA ACATGAACCT GCAGATCGCC ACGGCCGCCG AGCAGCAGAG CACGGTGGCC 
GAGGAGATCA ACCGCAGTGT GCTCAACGTG CGCGACGTCG CCGAGCAGTC GGCCGCCGCC 
AGCGAGCAGA CCGCCGCCGC CAGCGGCGAG CTGGCACGCC TGGGTACGCG GCTGCAGGCG 
CAGGTGGGGC GCTTCCGCCT GTAA 

 

Protein sequence

MYDWWVLQLA KLSVSRKLML GFGVLLALLL LVVVSSNRTL THQTALSEQL AEVATLMEQA 
QQAEQAHLAF DAGSDPREAE RLRRILTGML ERLRQLRDSE LDPAALAREA EAIEAYRGAF 
DDLAAADQQR SAARGVLVGS AQQALDSFAR LEELMDASLA QQAGDPQALQ RSRAVADLHQ 
QLLMVRYQVR GYVFERSDKA EQAAFAAFDA LRQAGTALHG QLPEEAGAAL EQAMRSLQDY 
RGGIEQFRAG VARTRQAQQA MQSSTQDMAR AGQTLTEAGR QLRESTASRD RASLWLIAAL 
ALAFGCVAGW AINRQIVRPL DEALALAEAI AAGDLGKRPQ NPLTLQRRDE LGQLQRVMQR 
MGDSLRELVG QIGDGVGQLA SSAEELSAVT EQARAGVNSQ KVETDQVATA MHEMTATVQD 
VARNAELASQ AARQADEEAR QGDAVVDQAV TRIERLATEM DGSSEAMARL RNDSEQIGSV 
LDVIKSVAEQ TNLLALNAAI EAARAGEAGR GFAVVADEVR GLAQRTQHST AEIEGLIQRL 
QQGAGEAADR LENSRSLTAS TVELARRAGV ALDSITRTVS DIQNMNLQIA TAAEQQSTVA 
EEINRSVLNV RDVAEQSAAA SEQTAAASGE LARLGTRLQA QVGRFRL