| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2822 |
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| Symbol | |
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| ID | 4605069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3360728 |
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| End bp | 3362749 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782233 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928694 |
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| Protein GI | 119775954 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.428629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA AAGTCGCCAC CAGAGTCATT GGCGGGTTCA GTTTTGTTAC CCTTCTGTTG
GTCATACTCG GTGGCGCCTC GCTGGTCACC AACAACAATC TCAAAGACAG CACCGCCATC
ATGCAGGAGT TGAGTATGCC TGCACTGGAG GCCACAGGGC ATCTTTCCGA AACCCTCAGC
GAACAGCAGC GGCTTATCCT CAAAGCTTTC CACAGTAAAA ATTCTTCGAC CGTGCCTGGG
CTGGAAAGAA CATTCGATCA GCTCAGCAGT GGCTTCAACA ACCAATTTAC CCTGCTTTCC
GGCCTGCTCA ATAACCGTGA TAATTTTCAG GGACAGCTTA GCGGCCTGAG CAGCAGTTAT
CAGGTGCTGG AAAGTAATAG CAAGGCCATG CTTAAAGCCC GCTTTGACTC GCTCTCGCAG
CAGGAAGAAC TGCTCAAGCT GCGCGAGAAG CTGGAAAACA GTGCCGACGA CGCCTCTTCC
AATCTGTTTG ATCTTATCGA TTTGGAAAGC AGCCAAAACC AAACTGAGCG TGAGATTGCC
GCTGCCGCTG GCGCCATAGA TACCACCATG ACGGGTATCA TCACGACAGT TTACGACCTG
GTCGCCGCCG AAGAGCGCAG CAAGTATGAA CTCATCTCCA AAGAGCTCGA CTATATGCTC
GGCGAAGTGA AGACCAAGAT GGAGTACATT TCCCGCCACG GTGAAGGCAT TATTGATGCC
GACCTGGTCA GCACCCTCAA TGATGACAGC ACCAAGGTGC TGAAAATGTT GGAAGGCAAG
GACACTCTGG TCACCCTCAA GTCCCGCCAG ATAGACAGTA CTCAGCTGAC CTCTGAGAAA
CTGACCCTGG TGGAAAAGAA TGCGCTGACA GTTACAGAGC AGATGAAGCG TCTAGCCAAA
GATATCGAAA CTGTCACCAA CGACATCAGC AATCAGGCCC TGAACGACAT CAACAGTGCC
TCTCTCAGAA CACTGATCCT GGTGGTGATT GCCATCGTTG TGGCCGTGGT CATCAGTTTT
GCCGTGGTGA GACCACTGAA ACGCTCGCTG GATGAGGTGA ACGGTGCCCT CAATGTGTTG
GCATCCGGCG ACCTCACTCA CAAGCTGGAC GACACCGGCC ACGATGAATT TGCCGAGCTG
TCCCGCAACT GTAACCGTTT GGTCGACAGC CTGCGCAGCC TGATTGCCAG TATCCTCGAC
CGTTCAAACC AACTGGCTGC AGCCGCCGAA GAAACCTCTG CCATTACCTC TCAAACTACC
ATAGGTATTC AGGAACAGAA GAGCCAGGTT GACCAGGTTG CAACGGCTAC CACTGAGCTA
AGCTCCAGTG CCCATCAGGT GAACATGAGC GCCGATGACG CCTTGAGCCA GATTAAGCAA
GCCGACGAAG AAACCCAGCA CATGCGCACC ATTGCCGATG AAAACAAGCG CACCATTTTG
TCGCTGGCAG ATGAAGTGGC CAAGGCCAGC AAGGTGATCA ACAAGGTGCA TTCTGACAGT
GCCTCTATCG GCTCAATTCT GGATGTTATC CGGGGCATTG CCGAGCAGAC CAATTTGTTG
GCACTCAACG CCGCCATTGA AGCCGCCCGT GCCGGTGAGC AGGGACGTGG CTTTGCCGTC
GTGGCCGACG AAGTTCGTAG CCTGGCGTCC CGTACCCAGG ACTCTACCCG AGAAATTCAG
CAAATGATTG AAGTGCTGCA GCAAGGCACT CAACAGGCTG TGGCCGTGAT GCAGTTGGGG
CAAAATCAGG CACAAAGCTG TGTGGAGAAA ACCGAGCAAG CCAACCAGGC GCTGCAAACC
ATCAGCCACT CTGTGCATAA AGCCTATGAT GCCGGCACTC ACATTGCTCA GGCGGCACAG
GAGCAGAATC TGGTCAGCCA GCAAGTTTCT GAGAAACTGG AACACATTGC CGCTATTTCC
GAAGAGACTG CGCTAGGTGC AGAGCAAACA GCCAAGTCCA GCCACGAGGT GGCACGCCTT
GCCGAAGAGC TGCAAAGCTC GGTGAAAGAG TTTAGGGTGT AA
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| Protein sequence | MKIKVATRVI GGFSFVTLLL VILGGASLVT NNNLKDSTAI MQELSMPALE ATGHLSETLS
EQQRLILKAF HSKNSSTVPG LERTFDQLSS GFNNQFTLLS GLLNNRDNFQ GQLSGLSSSY
QVLESNSKAM LKARFDSLSQ QEELLKLREK LENSADDASS NLFDLIDLES SQNQTEREIA
AAAGAIDTTM TGIITTVYDL VAAEERSKYE LISKELDYML GEVKTKMEYI SRHGEGIIDA
DLVSTLNDDS TKVLKMLEGK DTLVTLKSRQ IDSTQLTSEK LTLVEKNALT VTEQMKRLAK
DIETVTNDIS NQALNDINSA SLRTLILVVI AIVVAVVISF AVVRPLKRSL DEVNGALNVL
ASGDLTHKLD DTGHDEFAEL SRNCNRLVDS LRSLIASILD RSNQLAAAAE ETSAITSQTT
IGIQEQKSQV DQVATATTEL SSSAHQVNMS ADDALSQIKQ ADEETQHMRT IADENKRTIL
SLADEVAKAS KVINKVHSDS ASIGSILDVI RGIAEQTNLL ALNAAIEAAR AGEQGRGFAV
VADEVRSLAS RTQDSTREIQ QMIEVLQQGT QQAVAVMQLG QNQAQSCVEK TEQANQALQT
ISHSVHKAYD AGTHIAQAAQ EQNLVSQQVS EKLEHIAAIS EETALGAEQT AKSSHEVARL
AEELQSSVKE FRV
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