Gene Sputcn32_1426 details

Gene Information

• Locus tag: Sputcn32_1426
• ID: 5079676
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1620857
• End bp: 1622761
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640498555
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001182950
• Protein GI: 146292526
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGGTT TGCGCCGCCT GCTAGGAAAC ATGACGGTAA CCAATAAGTT AAGGCTTGGT 
TTTGGGATCT TGTTATTGCT GATATTTATT GTGGCAGCGG CTGGATACAG GGGACTTACC 
TCAATCGATA TCAGCAGTAG TCGGTTGGAG TTTATTGCCA ATGTCGATAA AACATTGCTT 
GCGGCCAAGG CTGCACGATT AGAATTTATC GCAAATGGCG ATTTAACCAA ATTGGATGAA 
CTCCAGAGCT TAATTGAAAA TACAAAAAGC GGTTTACAGC AACAATTGTC AGCGTCTAGC 
GATGCCCACG ATCGGCAGTA TCTTCAAGAA TCGTTAGTGG CGATGGATCG GTATCATCAA 
TCGATAAATC AGTTTAGTGA TGTGTTTAAG CATAAACAGG AATTGAAAGT CACGGGGGCT 
CAAGTGGGGG CCAAGTTGGT TGCCACCTAT GCGGAGCTGG TCGATAGAAT GACCAACAGG 
GCCCAAGCGA CACAAAATAC TGAATTATTA AAAGATGCCT TAAGTGTTAG CCAGCAAATG 
ACCATGTTAC GTTATCACAT CCGAGGCTAT GTCTATGATG CTAGTGATCT TAATTTAAAA 
ACGGCAAAAG ATGCCATTGC TAGATTGTCA CAGACTATCG CCACACTTAA GGGGGAGGAT 
ACCGTACAAG CCATCCAGAT ATTGGACCGT TACGACCATG ATATTGATGC TATGGTCAAT 
GTTAACCGTG ATATGGATAA CCTAGCCCAG TCAATGGGCG GCGCAGCACA AACATTGATG 
GTGAATATTC GTGAATTAGT TGACATCCAA AAGCATCGAC GGGCAGACGC TGATGCCCAA 
GCAAAGGCCG TGGTACTTGG CGCGTTAATT GTCGCCTTGG TTGTCGGCCC CTTACTTGCG 
TGGTTAATCA GTGGACAAAT TGTCGGGCCA CTTAAACAAA CTCTCCTTAC GGCGAGAAAA 
ATTGCCGCAG GTGATTTAAG CAGCACTATC CACTCAGAGC GTCAGGATGA GATGGGGGAA 
CTATTGCGTG CCATGGGTGA AATGAATAGC ACCCTTAAGC AAGTGTTGAC ACAAATAGGC 
GATAGCGTGG TGCAGTTGGC TTCATCGGCT GAGGTGCTTT CTGCGGTCAC TGAACAAAAT 
AGTGCGGGTA TGCAAAATCA GCGTAGTGAA ACTGACCAAG TTGCCACCGC GATTAATGAA 
ATGGCGGCGA TAGTGCAAGA GGTATCTACC AGTGCTGAAA ATGTCGCGCT AGCGGCTAAA 
GAGGCGGATC ACACCACTGC GATAGGTAAT AAAAAAGTTA TTGAAGCGGT CAGTCAAATC 
GAACTGTTAG CCAAGGAAAT CGCGACCACG GCATATGCGA TGGAGCGCTT ACAATCGGAA 
AGTGACAGTA TCGGTTCCGT CCTTGATGTG ATCAAATCGG TTGCACAACA GACCAATTTA 
CTCGCGCTAA ATGCGGCCAT TGAAGCAGCA AGAGCAGGTG AGGCGGGACG GGGATTTGCA 
GTGGTGGCCG ATGAGGTGCG AAGCCTTGCG AGTCGAACAC AATCCTCTAC CGAAGAAATT 
GAAAATATGA TTGTTAATTT GCAAAAGGGG ACACTGGAGT CGGTACAAAT GATGACCAAA 
AGCCGGACAT TGAGTGATGG CGCAGTGTCA TTATCCCGCG AAGCGGGTGA AATGTTAGTG 
GATATTGCCG ATGCGGTTAG CCGTATCCAG GATATGACAC ATCAAATCGC GGCTGCCTCG 
GAAGAACAAA GCGCCGTGGC AGAAGAGATT AATAAAAGTA TTGTGAGAGT GAGGGATATT 
GCCGAGCAAA CCGCTGATGG CGCGGCAGAA ACAGCGCACT CCGCTGATGA TCTTGCTAGC 
CTTGGTGTTA CGTTAAAAGG ATTACTAAGA CGTTTTCAGT TATAG 

 

Protein sequence

MEGLRRLLGN MTVTNKLRLG FGILLLLIFI VAAAGYRGLT SIDISSSRLE FIANVDKTLL 
AAKAARLEFI ANGDLTKLDE LQSLIENTKS GLQQQLSASS DAHDRQYLQE SLVAMDRYHQ 
SINQFSDVFK HKQELKVTGA QVGAKLVATY AELVDRMTNR AQATQNTELL KDALSVSQQM 
TMLRYHIRGY VYDASDLNLK TAKDAIARLS QTIATLKGED TVQAIQILDR YDHDIDAMVN 
VNRDMDNLAQ SMGGAAQTLM VNIRELVDIQ KHRRADADAQ AKAVVLGALI VALVVGPLLA 
WLISGQIVGP LKQTLLTARK IAAGDLSSTI HSERQDEMGE LLRAMGEMNS TLKQVLTQIG 
DSVVQLASSA EVLSAVTEQN SAGMQNQRSE TDQVATAINE MAAIVQEVST SAENVALAAK 
EADHTTAIGN KKVIEAVSQI ELLAKEIATT AYAMERLQSE SDSIGSVLDV IKSVAQQTNL 
LALNAAIEAA RAGEAGRGFA VVADEVRSLA SRTQSSTEEI ENMIVNLQKG TLESVQMMTK 
SRTLSDGAVS LSREAGEMLV DIADAVSRIQ DMTHQIAAAS EEQSAVAEEI NKSIVRVRDI 
AEQTADGAAE TAHSADDLAS LGVTLKGLLR RFQL