Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1426 |
Symbol | |
ID | 5079676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1620857 |
End bp | 1622761 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498555 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001182950 |
Protein GI | 146292526 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGTT TGCGCCGCCT GCTAGGAAAC ATGACGGTAA CCAATAAGTT AAGGCTTGGT TTTGGGATCT TGTTATTGCT GATATTTATT GTGGCAGCGG CTGGATACAG GGGACTTACC TCAATCGATA TCAGCAGTAG TCGGTTGGAG TTTATTGCCA ATGTCGATAA AACATTGCTT GCGGCCAAGG CTGCACGATT AGAATTTATC GCAAATGGCG ATTTAACCAA ATTGGATGAA CTCCAGAGCT TAATTGAAAA TACAAAAAGC GGTTTACAGC AACAATTGTC AGCGTCTAGC GATGCCCACG ATCGGCAGTA TCTTCAAGAA TCGTTAGTGG CGATGGATCG GTATCATCAA TCGATAAATC AGTTTAGTGA TGTGTTTAAG CATAAACAGG AATTGAAAGT CACGGGGGCT CAAGTGGGGG CCAAGTTGGT TGCCACCTAT GCGGAGCTGG TCGATAGAAT GACCAACAGG GCCCAAGCGA CACAAAATAC TGAATTATTA AAAGATGCCT TAAGTGTTAG CCAGCAAATG ACCATGTTAC GTTATCACAT CCGAGGCTAT GTCTATGATG CTAGTGATCT TAATTTAAAA ACGGCAAAAG ATGCCATTGC TAGATTGTCA CAGACTATCG CCACACTTAA GGGGGAGGAT ACCGTACAAG CCATCCAGAT ATTGGACCGT TACGACCATG ATATTGATGC TATGGTCAAT GTTAACCGTG ATATGGATAA CCTAGCCCAG TCAATGGGCG GCGCAGCACA AACATTGATG GTGAATATTC GTGAATTAGT TGACATCCAA AAGCATCGAC GGGCAGACGC TGATGCCCAA GCAAAGGCCG TGGTACTTGG CGCGTTAATT GTCGCCTTGG TTGTCGGCCC CTTACTTGCG TGGTTAATCA GTGGACAAAT TGTCGGGCCA CTTAAACAAA CTCTCCTTAC GGCGAGAAAA ATTGCCGCAG GTGATTTAAG CAGCACTATC CACTCAGAGC GTCAGGATGA GATGGGGGAA CTATTGCGTG CCATGGGTGA AATGAATAGC ACCCTTAAGC AAGTGTTGAC ACAAATAGGC GATAGCGTGG TGCAGTTGGC TTCATCGGCT GAGGTGCTTT CTGCGGTCAC TGAACAAAAT AGTGCGGGTA TGCAAAATCA GCGTAGTGAA ACTGACCAAG TTGCCACCGC GATTAATGAA ATGGCGGCGA TAGTGCAAGA GGTATCTACC AGTGCTGAAA ATGTCGCGCT AGCGGCTAAA GAGGCGGATC ACACCACTGC GATAGGTAAT AAAAAAGTTA TTGAAGCGGT CAGTCAAATC GAACTGTTAG CCAAGGAAAT CGCGACCACG GCATATGCGA TGGAGCGCTT ACAATCGGAA AGTGACAGTA TCGGTTCCGT CCTTGATGTG ATCAAATCGG TTGCACAACA GACCAATTTA CTCGCGCTAA ATGCGGCCAT TGAAGCAGCA AGAGCAGGTG AGGCGGGACG GGGATTTGCA GTGGTGGCCG ATGAGGTGCG AAGCCTTGCG AGTCGAACAC AATCCTCTAC CGAAGAAATT GAAAATATGA TTGTTAATTT GCAAAAGGGG ACACTGGAGT CGGTACAAAT GATGACCAAA AGCCGGACAT TGAGTGATGG CGCAGTGTCA TTATCCCGCG AAGCGGGTGA AATGTTAGTG GATATTGCCG ATGCGGTTAG CCGTATCCAG GATATGACAC ATCAAATCGC GGCTGCCTCG GAAGAACAAA GCGCCGTGGC AGAAGAGATT AATAAAAGTA TTGTGAGAGT GAGGGATATT GCCGAGCAAA CCGCTGATGG CGCGGCAGAA ACAGCGCACT CCGCTGATGA TCTTGCTAGC CTTGGTGTTA CGTTAAAAGG ATTACTAAGA CGTTTTCAGT TATAG
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Protein sequence | MEGLRRLLGN MTVTNKLRLG FGILLLLIFI VAAAGYRGLT SIDISSSRLE FIANVDKTLL AAKAARLEFI ANGDLTKLDE LQSLIENTKS GLQQQLSASS DAHDRQYLQE SLVAMDRYHQ SINQFSDVFK HKQELKVTGA QVGAKLVATY AELVDRMTNR AQATQNTELL KDALSVSQQM TMLRYHIRGY VYDASDLNLK TAKDAIARLS QTIATLKGED TVQAIQILDR YDHDIDAMVN VNRDMDNLAQ SMGGAAQTLM VNIRELVDIQ KHRRADADAQ AKAVVLGALI VALVVGPLLA WLISGQIVGP LKQTLLTARK IAAGDLSSTI HSERQDEMGE LLRAMGEMNS TLKQVLTQIG DSVVQLASSA EVLSAVTEQN SAGMQNQRSE TDQVATAINE MAAIVQEVST SAENVALAAK EADHTTAIGN KKVIEAVSQI ELLAKEIATT AYAMERLQSE SDSIGSVLDV IKSVAQQTNL LALNAAIEAA RAGEAGRGFA VVADEVRSLA SRTQSSTEEI ENMIVNLQKG TLESVQMMTK SRTLSDGAVS LSREAGEMLV DIADAVSRIQ DMTHQIAAAS EEQSAVAEEI NKSIVRVRDI AEQTADGAAE TAHSADDLAS LGVTLKGLLR RFQL
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