Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1798 |
Symbol | |
ID | 3367306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2070523 |
End bp | 2072568 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652146 |
Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
Protein accession | YP_234883 |
Protein GI | 66045042 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.668901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.381267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTGTG AGGTCCTCTC TCTCGACCGG TCCGTTATTC CAGACACATT AACTATCAAG TTAACTCTTT CAGCGCCGAC TCACGGGTAT TCCGGAAAAA TTAAAGGCAC ACACGTAATG AGCGCAAAAT GGTTGGACAA TCTGAAAGTC AGCAAGAAGC TCGGGCTGGG CTTTGCCGCT ATTTTGCTCG GGGTACTGAC CGTTACCGTG ATCGGTTACT CCAGCACCAA CCTGCTGATC GAGCGCATGG GCAAAAGCAG CAAGGTCGCC GAGATCAAGG CTGACGTTCT GAATGCCCGG ATCGCTGCGC AAGCCTATGC GACCGGCCCT ACCGCCGCAG GTGTGCAGAA TTACGCCAGC GCGCTGGATA CCTTGAGCCG CAGTGTCGAT CAGGGCCTGC AGGTGTTCGT GATCTCGAGC AACCTGGCCA AGCTGCGCGA GATCAAGGAG CAGGTGGGCG GTCTGAAGCA GACGTTCGAC CAGCTGGTCG GCATCAATCA GAAAGTCGAC GAGGCGTTGA AACCGATCAT CAAGGTGTCC GATGACGTCA GCGCGACCTT CGAGAATCTG CTGAACAAGA CCATTGACGA CACCTTGCGC GCGCCGAATG AAACCGGCAT CAGGCAGGTC AAGATCGCTG GCGACCTGCG TAACGGCATG ACCAATTTCC GTCTGGTGTT TCGCCGCTAC CTGAGCGTTC CGAATGCGGA CAACCGTCAG GCCACCTATA AGGCCGCCGA CGCCCTGATT GCGCAAGTGG ATGCCGCTCG CAGCCAGTTG CCTGTCGAGG CAAATGCCGC AGTGGATGCC GCGCTGGTGG CGTTGAAACA GTACAAGGTG CTGATGACGT CGATTTCGGA CATGCTTCAG CAGACCGAGC AGATCCGCAA TGACCTGCAA CAGCAATCCG TAGCGACCGC AGCCCGTGCC GATGATCTGG CGGCGCTGCA GGTCATCAGT GCCAAGAAAG AACAACAAAC CGCTGTGGTG CAGTTGCTCA GCGTAGCGCT GGTCGTGCTG CTGGTCGGCA TCTTTGCTGC GTTCCTGATC ACGCGTCAGA TTACCGTGCC GTTGAACAGC ACCGTGATTG CGGCGCGCCG TATTGCCGAC GGTGATCTGA CCCATGACAG CAGCACCACC CGCCAGGACG AACTGGGCCT GCTGCAGAAC ACCATGCAAC ACATGACCGT TTCGCTGCGC GGTCTGATCG GTGGCATCGG CAACGGTGTG ACGCAGATCG CCACGGCGGC CGAGCAGTTG TCTGCGGTCA GCGAGCAGAC CAGCGCGGGT GTCACCCTGC AGAAAAACGA AGTCGATCAG GTCGCCACCG CCATGAACGA AATGGCCTCC ACCGTACAGG AAGTGGCGCG CAACACCGAA GACGCTTCGC AAGCCGCCAA GCAGGCCAGC GAGCGCGCCG CGCACGGTAG CAGTGTGGTG CAGCATGCCA CGCGCGAAAT CGGTCAATTG GCCGGTGAAG TGCAGCAACT GGGTGAAGCC ATGCAGCGCC TGACCGAAGA CAGCGGCAAG ATCGGCAGCG TGATTGACGT GATCAAGGCG GTGGCCGAGC AGACCAACCT GCTGGCGCTC AACGCAGCCA TCGAGGCTGC ACGGGCAGGC GAGCAGGGTC GCGGTTTTGC CGTGGTGGCT GACGAAGTCC GCTCGCTGGC TCAGCGTACG CAGAACTCCA CAACCGAAAT CGAAGCGCTG ATCCAGGCGT TGCAAAAAGG TACAGGCGCC GCCTCGGGCC TGATGGACGC CAGCCTGCAG CGCACTGAAG GCACCGTGGT GCTCGCTCGT CAGGCTGAAC AGGCGCTGGT GGAAATCAAC CAGTCCATTG GCACCATTGA ACAGATGAGT CAGCAGATTT CCGCCGCGGC CGAGCAACAG AGCGCGGTGA CCGAAGAAAT CAACCGCAGC GTACTCAGTG TTCGCGACAT TGCCGATCAG TCCGCTTCGG CCACTGAGCA AAGCGCTGCG TCGACCGTCG AGCTGGCCCG TCTGGGCAGC GATTTGCAGA GCATGGTCGC GCGTTTCAAG ATTTAA
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Protein sequence | MGCEVLSLDR SVIPDTLTIK LTLSAPTHGY SGKIKGTHVM SAKWLDNLKV SKKLGLGFAA ILLGVLTVTV IGYSSTNLLI ERMGKSSKVA EIKADVLNAR IAAQAYATGP TAAGVQNYAS ALDTLSRSVD QGLQVFVISS NLAKLREIKE QVGGLKQTFD QLVGINQKVD EALKPIIKVS DDVSATFENL LNKTIDDTLR APNETGIRQV KIAGDLRNGM TNFRLVFRRY LSVPNADNRQ ATYKAADALI AQVDAARSQL PVEANAAVDA ALVALKQYKV LMTSISDMLQ QTEQIRNDLQ QQSVATAARA DDLAALQVIS AKKEQQTAVV QLLSVALVVL LVGIFAAFLI TRQITVPLNS TVIAARRIAD GDLTHDSSTT RQDELGLLQN TMQHMTVSLR GLIGGIGNGV TQIATAAEQL SAVSEQTSAG VTLQKNEVDQ VATAMNEMAS TVQEVARNTE DASQAAKQAS ERAAHGSSVV QHATREIGQL AGEVQQLGEA MQRLTEDSGK IGSVIDVIKA VAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRSLAQRT QNSTTEIEAL IQALQKGTGA ASGLMDASLQ RTEGTVVLAR QAEQALVEIN QSIGTIEQMS QQISAAAEQQ SAVTEEINRS VLSVRDIADQ SASATEQSAA STVELARLGS DLQSMVARFK I
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