More than 300 homologs were found in PanDaTox collection
for query gene Shew_0876 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  64.84 
 
 
673 aa  834    Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  65.13 
 
 
673 aa  836    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  66.32 
 
 
673 aa  852    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_004347  SO_3642  methyl-accepting chemotaxis protein  65.13 
 
 
673 aa  795    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  64.99 
 
 
673 aa  834    Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  100 
 
 
674 aa  1341    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  67.51 
 
 
673 aa  870    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  65.13 
 
 
673 aa  835    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  73.33 
 
 
675 aa  944    Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  60.68 
 
 
673 aa  788    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  65.43 
 
 
673 aa  817    Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  65.28 
 
 
673 aa  816    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  63.06 
 
 
673 aa  813    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  65.43 
 
 
673 aa  816    Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_009438  Sputcn32_0986  methyl-accepting chemotaxis sensory transducer  64.24 
 
 
673 aa  792    Shewanella putrefaciens CN-32  Bacteria  normal  0.603679  n/a   
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  70.37 
 
 
675 aa  863    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  42.67 
 
 
674 aa  506  9.999999999999999e-143  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  43.09 
 
 
672 aa  476  1e-133  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  42.96 
 
 
674 aa  473  1e-132  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
543 aa  264  4.999999999999999e-69  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
637 aa  263  1e-68  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  42.15 
 
 
642 aa  258  3e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
674 aa  254  3e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.54 
 
 
637 aa  253  8.000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  33.19 
 
 
666 aa  251  3e-65  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
541 aa  251  3e-65  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
640 aa  248  4e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.77 
 
 
642 aa  247  4.9999999999999997e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  29.14 
 
 
672 aa  247  6e-64  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_007954  Sden_2638  chemotaxis sensory transducer  30.56 
 
 
675 aa  246  9e-64  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
638 aa  245  1.9999999999999999e-63  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41.43 
 
 
629 aa  245  1.9999999999999999e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
638 aa  245  1.9999999999999999e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.71 
 
 
640 aa  245  1.9999999999999999e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  42.81 
 
 
679 aa  244  3e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  43.98 
 
 
638 aa  243  7e-63  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
564 aa  240  5e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
552 aa  240  5e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  41.19 
 
 
559 aa  238  2e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
636 aa  239  2e-61  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
572 aa  238  4e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
552 aa  238  4e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  42.36 
 
 
640 aa  236  7e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
675 aa  236  1.0000000000000001e-60  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  42.34 
 
 
541 aa  236  1.0000000000000001e-60  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  42.07 
 
 
640 aa  236  2.0000000000000002e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  40.82 
 
 
681 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
675 aa  235  2.0000000000000002e-60  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.65 
 
 
716 aa  234  3e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
638 aa  234  3e-60  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
544 aa  234  6e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
573 aa  233  6e-60  Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_009052  Sbal_1402  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
675 aa  233  6e-60  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1386  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
675 aa  233  6e-60  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.28 
 
 
638 aa  233  8.000000000000001e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  42.24 
 
 
647 aa  233  8.000000000000001e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.7 
 
 
676 aa  232  2e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  38.55 
 
 
712 aa  231  4e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.27 
 
 
712 aa  231  4e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  37.14 
 
 
634 aa  228  2e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  33.06 
 
 
653 aa  229  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
650 aa  229  2e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
639 aa  229  2e-58  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.83 
 
 
713 aa  229  2e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  41.44 
 
 
639 aa  228  4e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.51 
 
 
624 aa  228  4e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
658 aa  227  4e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  38.92 
 
 
621 aa  227  6e-58  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
573 aa  227  6e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
541 aa  226  8e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
438 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  33.33 
 
 
653 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
639 aa  225  2e-57  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
639 aa  225  2e-57  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
639 aa  225  2e-57  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
541 aa  224  3e-57  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
541 aa  224  3e-57  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  42.69 
 
 
541 aa  224  4.9999999999999996e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
638 aa  224  4.9999999999999996e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
540 aa  223  7e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
634 aa  223  8e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1313  methyl-accepting chemotaxis sensory transducer  28.15 
 
 
675 aa  223  8e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
541 aa  223  9e-57  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  40.11 
 
 
553 aa  222  9.999999999999999e-57  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.74 
 
 
633 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
541 aa  223  9.999999999999999e-57  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  37.13 
 
 
541 aa  223  9.999999999999999e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
572 aa  223  9.999999999999999e-57  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  38.04 
 
 
541 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.95 
 
 
523 aa  221  3e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  41.95 
 
 
647 aa  221  3e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.08 
 
 
619 aa  221  3.9999999999999997e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
547 aa  221  3.9999999999999997e-56  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
541 aa  221  3.9999999999999997e-56  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  37.68 
 
 
543 aa  221  5e-56  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
555 aa  221  5e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
639 aa  220  6e-56  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
425 aa  220  7e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
541 aa  220  7.999999999999999e-56  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
541 aa  220  7.999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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