More than 300 homologs were found in PanDaTox collection
for query gene Shewana3_3212 on replicon NC_008577
Organism: Shewanella sp. ANA-3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  86.48 
 
 
673 aa  1146    Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  60.98 
 
 
673 aa  782    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  62.67 
 
 
675 aa  799    Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_004347  SO_3642  methyl-accepting chemotaxis protein  91.08 
 
 
673 aa  1127    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  65.43 
 
 
674 aa  863    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  68.2 
 
 
673 aa  887    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  65.63 
 
 
675 aa  806    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  86.78 
 
 
673 aa  1147    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  66.27 
 
 
673 aa  874    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  94.95 
 
 
673 aa  1216    Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  100 
 
 
673 aa  1341    Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  94.95 
 
 
673 aa  1215    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0986  methyl-accepting chemotaxis sensory transducer  86.48 
 
 
673 aa  1097    Shewanella putrefaciens CN-32  Bacteria  normal  0.603679  n/a   
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  64.49 
 
 
673 aa  827    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  86.92 
 
 
673 aa  1149    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  86.63 
 
 
673 aa  1146    Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  43.7 
 
 
674 aa  528  1e-148  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  42.88 
 
 
672 aa  468  9.999999999999999e-131  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  41.99 
 
 
674 aa  461  9.999999999999999e-129  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  33.14 
 
 
666 aa  259  1e-67  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
543 aa  253  5.000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  29.97 
 
 
672 aa  251  4e-65  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  42.24 
 
 
637 aa  250  8e-65  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.84 
 
 
637 aa  249  2e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
636 aa  248  3e-64  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
674 aa  244  3.9999999999999997e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44 
 
 
679 aa  243  7.999999999999999e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
640 aa  242  1e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
552 aa  242  2e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
572 aa  241  4e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.99 
 
 
629 aa  240  5e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.69 
 
 
681 aa  240  5.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
564 aa  240  5.999999999999999e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.43 
 
 
640 aa  240  6.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  40.11 
 
 
642 aa  239  1e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
541 aa  239  1e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
638 aa  238  4e-61  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  41.73 
 
 
640 aa  238  4e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  39.23 
 
 
639 aa  237  5.0000000000000005e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  41.86 
 
 
676 aa  236  7e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
638 aa  236  8e-61  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
638 aa  236  1.0000000000000001e-60  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007954  Sden_2638  chemotaxis sensory transducer  29.71 
 
 
675 aa  236  1.0000000000000001e-60  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  39.44 
 
 
640 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.4 
 
 
642 aa  234  3e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.86 
 
 
638 aa  232  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.22 
 
 
559 aa  232  2e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.68 
 
 
634 aa  231  5e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
638 aa  230  8e-59  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
544 aa  228  2e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
573 aa  228  4e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  37.86 
 
 
633 aa  227  5.0000000000000005e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  27.62 
 
 
675 aa  227  5.0000000000000005e-58  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
634 aa  227  6e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  42.32 
 
 
650 aa  226  7e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  27.62 
 
 
675 aa  226  8e-58  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.7 
 
 
712 aa  226  1e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009665  Shew185_1386  methyl-accepting chemotaxis sensory transducer  27.62 
 
 
675 aa  225  2e-57  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
438 aa  225  2e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.08 
 
 
619 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.44 
 
 
712 aa  225  2e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.26 
 
 
713 aa  225  2e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
634 aa  225  2e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1402  methyl-accepting chemotaxis sensory transducer  27.33 
 
 
675 aa  224  3e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  38.87 
 
 
653 aa  224  4e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
634 aa  224  4e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
639 aa  223  7e-57  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
658 aa  223  8e-57  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  45.45 
 
 
624 aa  223  8e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  38.04 
 
 
647 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_009438  Sputcn32_1313  methyl-accepting chemotaxis sensory transducer  28.9 
 
 
675 aa  223  9.999999999999999e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
639 aa  222  1.9999999999999999e-56  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
573 aa  221  3e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
547 aa  221  3e-56  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
716 aa  221  3.9999999999999997e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  39.43 
 
 
653 aa  220  6e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
639 aa  219  8.999999999999998e-56  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.83 
 
 
541 aa  219  1e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
555 aa  219  1e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
552 aa  219  1e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008345  Sfri_1215  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
678 aa  219  1e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  43 
 
 
647 aa  218  2e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
630 aa  219  2e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  38.21 
 
 
543 aa  218  2e-55  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
638 aa  219  2e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  40.51 
 
 
638 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
639 aa  218  4e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
639 aa  218  4e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  38.57 
 
 
568 aa  217  5e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
572 aa  217  5e-55  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  31.99 
 
 
548 aa  216  8e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  216  9.999999999999999e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  39.94 
 
 
553 aa  216  9.999999999999999e-55  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  216  9.999999999999999e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  40.54 
 
 
541 aa  216  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  216  9.999999999999999e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  40.23 
 
 
596 aa  216  9.999999999999999e-55  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
640 aa  216  9.999999999999999e-55  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  42.07 
 
 
561 aa  216  9.999999999999999e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>