Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0902 |
Symbol | |
ID | 4251693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1051497 |
End bp | 1053518 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117465 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_733039 |
Protein GI | 113969246 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.73728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA ATGTAGCCAC CCGAGTCATT GGCGGGTTTA GTGTTGTTAC ACTTTTACTT GTGTTGTTAG GATTTACCTC GTACCTGACG AACATTAGCC TCAAAGATAG TTCGGCAATG ATGCAAGAGT TAAGCTTGCC AGCCCTGAAG GCCACCACTC ATTTAACCGA ATCCTTGAGC GAACAACAGC GCCAAGTGCT CATTGCCTTT CATGCGCCAA AATCCTCTAA CATTCCCGAT ATCCGTAAAG TCTTTAGCGA CCACGGTAGC CAGTTTAAAA ATGAGATCAG TAACCTGACG CGACTGGTTC AAGGGCAAGC TAACCTTTCA TCGTTGATCT CACAACTGGA TGGCAGTTTC TCGACCTTTG AACGTGACAG CCTCGTCATG CTCAATGAGC GCGAAGCCAC TCTCAGCAAA CAAGAGCAAC TCATCGGATT AAAGAAAAAG CTGGAAAATG CCGCCGATGA TGCTTCATCG GGATTACTCG ATATTATCGA CCTAGAAAAC AGCCAAAACC CCGATGCTCA GAGTCTTGCG GCATCGGCAA GCGCTATCGA TACCAGCATG GGTAATATCA TCACCACCAT TACCGATTTA GTCACCAATG ACGAAATGAG TAAGCATGAG CTTATTTCTA AAGAACTCGA CTACATCCTG AGCGAGAGCA AAAACAAGCT TGAGTACGTC AACCGCCATG CGCAGGATAT TGTGGATGCG GACACCTTAA AATCCGTCAA CGAAGATATT AAAAAAGTCC TTGGGCTGCT CGAAGGCTCT GACTCTATGG TGCAACTTAA GGCGAGCCAA CTAACCCACG CTCAGGCGGC GGCAAATCAA CTGGCCATCA TTGAGAAAGA CGTCAAAGTC ATTGACCGCA ATATGGAAGA TGTAAGTAAT AACATTGAGT CGGCTGCCGC TGAAATGAGC CAAGCCACCA TAGCCAAAAT TGATTCGGCT AGTATCCGTA CCATTATCGT AGTGCTAATC GCTATCGTTG CCGCCGTCAT CATCAGTTTT GCCGTGGTTG CGCCATTGAA GCGTTCACTC TACCAAGTTA ACAATGCTCT TAACGTGTTA GCCTCTGGCA ATTTAACTCA TAAACTGGAT GATTCTGGCC ACGATGAATT TGCTGAACTG GCGAAAAACT GTAACCGTTT AGTCGACAGT TTACGCAGCC TAATCGTCGG TATCTTGGAC CGCTCTAACC AGCTCGCTGC TGCAGCAGAG CAAACCTCGG CAATCACGGC GCAAACCACG ACGGGCATTC AAGAGCAAAA GAACCAAGTC GACCAAGTTG CGACTGCGAC CACAGAGTTA AGCTCCAGCG CACAACAAGT GTCGATGAGC GCCGACGATG CACTCGCGCA AATCAAGCAG GCCGATCAAG AAGCCAAACA CATGCGCACT ATCGCCGAAG AGAATAAGCG CACCATTTTA GCCCTCGCTG ACGAAGTCGC TAAAGCAGGC CAAGTGATCA ACAAAGTGCA ATCGGACAGC GCCTCAATCG GCTCGATCCT CGATGTTATT CGTGGCATTG CCGAGCAGAC TAACCTGCTG GCATTAAACG CAGCCATTGA AGCGGCGCGC GCCGGAGAAC AGGGCCGTGG TTTCGCGGTC GTTGCCGATG AGGTGCGCAG CCTTGCATCG AGAACCCAAG TGTCGACCCG CGAGATCCAA CAAATGATCG AAGTGCTGCA ACAGGGCGCC CAGCAAGCCG TGGCAGCAAT GGATATGGGT CGTGCCCAAG CCAATGCCTG CGTCGATAAA ACCGAGCAAG CTAACCTCGC CCTAGAAACC ATCAGTCAGT CGGTGCACAA AGCCTATGAT GCAGGCACGC ACATTGCCCA TGCTGCGCAG GAGCAGAATC TGGTAAGTCA GCAAGTGTCT GAGAAACTTG AGCATATCGC GGCCATTTCG GAAGAGACCG CCATCGGCGC TGACCAAACA GCACAATCGA GCCATCAGGT GGCTAAGCTT GCCGAAGAGC TACAAGCTTC TGTCGGTGAA TTTAGAGTGT AA
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Protein sequence | MKVNVATRVI GGFSVVTLLL VLLGFTSYLT NISLKDSSAM MQELSLPALK ATTHLTESLS EQQRQVLIAF HAPKSSNIPD IRKVFSDHGS QFKNEISNLT RLVQGQANLS SLISQLDGSF STFERDSLVM LNEREATLSK QEQLIGLKKK LENAADDASS GLLDIIDLEN SQNPDAQSLA ASASAIDTSM GNIITTITDL VTNDEMSKHE LISKELDYIL SESKNKLEYV NRHAQDIVDA DTLKSVNEDI KKVLGLLEGS DSMVQLKASQ LTHAQAAANQ LAIIEKDVKV IDRNMEDVSN NIESAAAEMS QATIAKIDSA SIRTIIVVLI AIVAAVIISF AVVAPLKRSL YQVNNALNVL ASGNLTHKLD DSGHDEFAEL AKNCNRLVDS LRSLIVGILD RSNQLAAAAE QTSAITAQTT TGIQEQKNQV DQVATATTEL SSSAQQVSMS ADDALAQIKQ ADQEAKHMRT IAEENKRTIL ALADEVAKAG QVINKVQSDS ASIGSILDVI RGIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLAS RTQVSTREIQ QMIEVLQQGA QQAVAAMDMG RAQANACVDK TEQANLALET ISQSVHKAYD AGTHIAHAAQ EQNLVSQQVS EKLEHIAAIS EETAIGADQT AQSSHQVAKL AEELQASVGE FRV
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