Gene Shew185_1386 details

Gene Information

• Locus tag: Shew185_1386
• ID: 5371206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 1669716
• End bp: 1671743
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640829585
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001365599
• Protein GI: 152999918
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGACGC TTACCATAAA ACAAAAAATC ATTTTTAGCT TTAGTGCCAT CGGCGCCCTG 
CTCATCGCTG GCAGCAGCTT CTTCTATTAT TCACTCTCAC AAGTACAAAC CGCCTATCAA 
AATATCGAAA CCTTAGCCGT ACCGGTGCAA AAGCAGAGTA ATAGCTTGCA ACTGGTACTG 
TTGAAAATGT CACGCCTTGC CACCTTGGCC CACAGCCAGC AAGACACAGC CGCCTTAACC 
AAAAGTCAGC AAGCATTTAC AGCGCTGCAG AAGAAATATC AAAGTATCGA AAATGAGTTA 
ACGGAGCGAG TGGCAGATCA ATCTAAGATG CAGACTTCCC TGCACGAGGC GCAGGCTAGA 
TACCAAGCCT ATTTGCAACA AAGCCAAGCC ATGTTTAGTG CGAAACTCGC CAATGAACAA 
GCAAAGCAGC AATACCAACA ACTTTTCCAA CGCTTTAACG ATGCCAAGAC CAACGCCAGT 
AATGCGATGA TCGATCTCGA AACCCTGTCC ATCCCCGATA ATCCCACTCT GCTCGAAGAG 
ATTGTCGGTA CAGGCACGCG TATCGACGAC ATGTTGTATA CGCTAACCAA CACTATGGGA 
GAGCTGATCC ACACTCAAAG TTTGGAGGTG ACCCAATCGC ACCAGCAAGA TGTCAGCATC 
TTACTGGGTA ACCTCACCAC TAACTTTACC TTTTTAAAAC AACAAACTGA TGGGCTTGAT 
ACCTTAGGCT TGCTGCAAAC CTTCGAACAG CAATATGCGA TTATCAATAC CTTACTCGCA 
GCCCCTGCCG AGCTTTATAA AACACAACAA GCCGTGGTTG AGGCGCAGCT ACAAGCCGAG 
CAACATTACC TCGATGCCGA TAAAGAATTT AACGCCAATA ATCTCGCCTT AGACAAGTTA 
ATCACCTTAG CCGATCGCCG ATTTAGCAGC CTGCAAACCA TTGCCAGCAA TGCGATTGAG 
CAAGGGCAAA CCTTAGCGAT AGTGCTCGCA TTGGTGTTTA TCGTTATGGT GAGTTTTATT 
TCCTTCTTCA CCTCCAAGGC CATGCTCAAT CCGCTAGCGT TAGTGAATGG CGCGCTGGCG 
AGCATCGCCC GTGGGGATTT ATCTAAACGC ATTCACAAAC GCCATGATGA TGAATTTGGC 
ACCCTAATTG ATAACATGAA TACCTTGAGT GACGACCTTG CCAAGCTACT CACCAATATC 
AGCCAAAATG CCCATTCGCT GGACAGCTCA GCCACCCAAA CCAATGAGCA AGGTCAGCGC 
ATCGCCAATG CAGCAACCGC GCAAATCAGC CGCGTCGATG AGACTAAAGC CTTAGCAGAA 
CAGATGTTTA CCAGTTCTAA TTTGGTGACA GAACAGGCCA GTGAGTCGGC AAAACAAATC 
AACCAAGCCT CTAAATACGG TAATCAAGTG AAGCAAATTG CCGATGATAA TCGCAATAAA 
ATTGCCGAAC TGAGCGCCCG CTTAAGTAGC TCGGTTGAGA TCATGTCTCG CTTGAGCATT 
CAAAGCGATA ATATTGGCAG CATTTTAACC ACCATTAGCA ACATTGCCGA ACAAACCAAT 
TTGCTGGCAC TGAACGCCGC CATTGAAGCC GCCAGAGCGG GGGAACATGG ACGGGGTTTT 
GCCGTCGTGG CCGATGAAGT GCGATCCCTT GCCTCACGCA CTCAAGCTGC CACCGCTGAA 
ATTCAAACCA TGATCACGGC CCTGCAAAAA GAGACCTCCA CGGCAGCGAG TGCAATAACC 
ACGGGGCAAA ATCAGGCAAA CGAATGTGTC GGACAAAGCC AAACCCTGCA GGATGCTATC 
GCCCACATAG AAAGTACCTT ACACACGCTC AATGACATGA GTCTAGAGAT CACCCACGCC 
GCCCACGAGC AGTTAGATTA CAGTCAACGT ATTGAGTCGA GCATGAGCGA GGCGGCGCAA 
GCGGCGGAAC AAAATGCCAA TGAAGCCATG GACATGGCCA AACGCAGCAA CGAAGTCACC 
ACGCTTGCCC ACTCACTCAC CAGCTCAGTG GAACGCTTTA AACTCTAG 

 

Protein sequence

MLTLTIKQKI IFSFSAIGAL LIAGSSFFYY SLSQVQTAYQ NIETLAVPVQ KQSNSLQLVL 
LKMSRLATLA HSQQDTAALT KSQQAFTALQ KKYQSIENEL TERVADQSKM QTSLHEAQAR 
YQAYLQQSQA MFSAKLANEQ AKQQYQQLFQ RFNDAKTNAS NAMIDLETLS IPDNPTLLEE 
IVGTGTRIDD MLYTLTNTMG ELIHTQSLEV TQSHQQDVSI LLGNLTTNFT FLKQQTDGLD 
TLGLLQTFEQ QYAIINTLLA APAELYKTQQ AVVEAQLQAE QHYLDADKEF NANNLALDKL 
ITLADRRFSS LQTIASNAIE QGQTLAIVLA LVFIVMVSFI SFFTSKAMLN PLALVNGALA 
SIARGDLSKR IHKRHDDEFG TLIDNMNTLS DDLAKLLTNI SQNAHSLDSS ATQTNEQGQR 
IANAATAQIS RVDETKALAE QMFTSSNLVT EQASESAKQI NQASKYGNQV KQIADDNRNK 
IAELSARLSS SVEIMSRLSI QSDNIGSILT TISNIAEQTN LLALNAAIEA ARAGEHGRGF 
AVVADEVRSL ASRTQAATAE IQTMITALQK ETSTAASAIT TGQNQANECV GQSQTLQDAI 
AHIESTLHTL NDMSLEITHA AHEQLDYSQR IESSMSEAAQ AAEQNANEAM DMAKRSNEVT 
TLAHSLTSSV ERFKL