Gene MADE_03417 details

Gene Information

• Locus tag: MADE_03417
• ID: 6776704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 3677148
• End bp: 3679172
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642756865
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_002127703
• Protein GI: 196158214
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.617562
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA CGGTAGCCAC ACGCGTAATC GGGGGATTTG TCGCGATTAG CGCACTTCTA 
ATCGTCATTA GTGTTGTTTC ACTTTATAAC CTCAACTCAA TAGGCTCTGC TACAGAAGAA 
GTTAATGACG TTGCTCTACC TACGGTAGCG GGCAGCAACG CATTAAAAGC CAGCTTCCTC 
AACATGGGGC GGCTAACTTT TGAAAGCTAT ATCGAAGAAA ACGTCAGTGA ATTAAAGGAC 
AAACGAGCGT CTTTTAACTC TGCTAAAGAT ACGTTTGAAA GCGAGTATAA AAAGTTAGCG 
CAGGCTGTTA ACAACGAGCC AGAGTTAAAA AGCACACTCA ACAGTGTGCG TGAGTCATAC 
GAAACGTATA TTAACAACGT TGAAGCTATG TATAAAAACC ACCAAATGTA TCTTGATTTA 
CGTAACAGTA TTGAAGATAG ACTGGGTGAT GCGGAAGATA ACGCCGATGA TGCTTCAACC 
TACCTTCTGG ACTTTTCAGA TTTAGATAGC GTTCAACAAG ATTCAAACCT TAGACGTGCA 
GCTGAGATTG GCGGTCAACT TGAAACGTCA CTGCTGTCTT TACTCACCGT ATCTTACGAG 
TACATTAAAA CCCAGACGCT AGTGCGTTCA CAGACGCTAG GTAACGAAGT AGACCTTGTT 
GTTGAGAAAG TGGTTACGCA GTTAAGCGAC ATGATGCAAG CTGCTGGCGG TCGTGACGAC 
TCAGGTACGC TGGATGATAT TAATGACCTT GTAAACGACG CAATAAATGC AATAAAAGCA 
AACGATGGCG TAGTCCAACT CCACGTGGAC CGCTTAGAGC GTAGAAATGA TGCAGAGAAA 
GCGCTGAACG CATCTGATCA AAACATTACG CAAGGTGTGG TTGCACTTGA AAACTTGCTA 
ACGTTGGCGG ACAAAAAAGC GTCACACGTA GAAAGCCAAG TAAACAGTGC CATTGCAACG 
GGCAACACGT TTGTTATCGT TGTTGTGATC ATTTCTATCG CGGTTGCTGC GTTCATAGGT 
TACGTGACAG TACGCGCTAT TACACGCCCA CTTTATCGCG TAAATGAGTT ACTCACTGTT 
GCCTCATCGG GTGACCTAAC TCATCGTCTT GATGATTCAG CACAAGACGA ATTCGGTCTG 
TTAGCTCGAA ACTGTAATGC TTTAATAGGC AGCCTTAAAG AGCTGATTAC CGGCATCAAT 
GTTCGCGCTG AGCAGTTAGC TGCGGCGTCA GAGCAAACGT CGGCAGTCAC CGCGCAAACT 
ACTCATTCAA TTCAGGATCA GAAGTCTCAG ATTGGCCAAG TAGCGACAGC AACAACAGAA 
ATGCACTCTA CGTCTCAGCT GGTCGTGCAA AATGCTGAAG ATACGCTTAG CCAAATTCGC 
CATGCTGATG CTGAAGCCGA AAACGTGCGT CAAATTTCGT TAGAGAATAA GAACACCATC 
GAAATTCTGT CTCGCGACGT GCAAGAAGCG GCCGACGTTA TTAACAAGCT GCATCAAGAC 
AGCGCTAGTA TTGGCGGTAT TCTGGACGTT ATCCGCGGTG TTGCCGATCA AACTAACTTG 
CTAGCCTTGA ACGCAGCTAT CGAAGCTGCC CGTGCCGGTG AACAAGGCCG AGGCTTTGCG 
GTAGTTGCTG ATGAAGTAAG AACCCTTGCT AGCCGAACCC AAGAGTCGAC ACAAGAAATC 
AATGCCATGA TTGAGGTGCT TCAAGCGGGC GCCGAAAAAG CGGTAGCGGT TATGGACCAA 
GGCAAAGACC AAACAGCGGC ATGTGTTGAG CAAACAGAGA AAGCAACGCA GGCGTTAGAT 
ATTATTACAG ACGCGGTTCA CAAAGCGCAT GATGTAAGCT CGCAAATTGA GCAGTCTGCC 
CGCGAACAGA ACACGGTCTC GCAAGAAATC AGTGAAAAGC TTGAAACCAT TGTGGGTATT 
GCAGAAGAAA CCACAGCAGG TGCACAGCAA ACGTCTGAAT CTAGCCATGA AGTAGCGCGT 
CTGGCAGACG AACTTCAACA GTCTATCAGA CAGTTTAAAG TGTAA 

 

Protein sequence

MKITVATRVI GGFVAISALL IVISVVSLYN LNSIGSATEE VNDVALPTVA GSNALKASFL 
NMGRLTFESY IEENVSELKD KRASFNSAKD TFESEYKKLA QAVNNEPELK STLNSVRESY 
ETYINNVEAM YKNHQMYLDL RNSIEDRLGD AEDNADDAST YLLDFSDLDS VQQDSNLRRA 
AEIGGQLETS LLSLLTVSYE YIKTQTLVRS QTLGNEVDLV VEKVVTQLSD MMQAAGGRDD 
SGTLDDINDL VNDAINAIKA NDGVVQLHVD RLERRNDAEK ALNASDQNIT QGVVALENLL 
TLADKKASHV ESQVNSAIAT GNTFVIVVVI ISIAVAAFIG YVTVRAITRP LYRVNELLTV 
ASSGDLTHRL DDSAQDEFGL LARNCNALIG SLKELITGIN VRAEQLAAAS EQTSAVTAQT 
THSIQDQKSQ IGQVATATTE MHSTSQLVVQ NAEDTLSQIR HADAEAENVR QISLENKNTI 
EILSRDVQEA ADVINKLHQD SASIGGILDV IRGVADQTNL LALNAAIEAA RAGEQGRGFA 
VVADEVRTLA SRTQESTQEI NAMIEVLQAG AEKAVAVMDQ GKDQTAACVE QTEKATQALD 
IITDAVHKAH DVSSQIEQSA REQNTVSQEI SEKLETIVGI AEETTAGAQQ TSESSHEVAR 
LADELQQSIR QFKV