More than 300 homologs were found in PanDaTox collection
for query gene MADE_03417 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  61.57 
 
 
674 aa  807    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  100 
 
 
674 aa  1345    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  45.52 
 
 
672 aa  523  1e-147  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
674 aa  499  1e-140  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
673 aa  494  9.999999999999999e-139  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  42 
 
 
673 aa  482  1e-135  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  42 
 
 
673 aa  485  1e-135  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
675 aa  467  9.999999999999999e-131  Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
673 aa  462  1e-129  Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
673 aa  461  9.999999999999999e-129  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
673 aa  461  9.999999999999999e-129  Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
673 aa  461  9.999999999999999e-129  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
673 aa  459  9.999999999999999e-129  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  42.14 
 
 
673 aa  461  9.999999999999999e-129  Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
673 aa  458  1e-127  Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  41.41 
 
 
673 aa  456  1e-127  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3642  methyl-accepting chemotaxis protein  42.67 
 
 
673 aa  444  1e-123  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0986  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
673 aa  444  1e-123  Shewanella putrefaciens CN-32  Bacteria  normal  0.603679  n/a   
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  41 
 
 
675 aa  441  9.999999999999999e-123  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1386  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
675 aa  303  8.000000000000001e-81  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
675 aa  302  1e-80  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
675 aa  302  2e-80  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1402  methyl-accepting chemotaxis sensory transducer  30.96 
 
 
675 aa  301  2e-80  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1313  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
675 aa  278  3e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  31.54 
 
 
666 aa  264  3e-69  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_007954  Sden_2638  chemotaxis sensory transducer  29.68 
 
 
675 aa  258  3e-67  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  48.81 
 
 
637 aa  253  9.000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  42.22 
 
 
543 aa  248  3e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  28.07 
 
 
672 aa  246  9.999999999999999e-64  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  28.96 
 
 
663 aa  243  9e-63  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
636 aa  242  2e-62  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  28.12 
 
 
674 aa  242  2e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_0209  methyl-accepting chemotaxis sensory transducer  27.74 
 
 
677 aa  240  5e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.17 
 
 
713 aa  237  7e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
564 aa  234  3e-60  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  29.08 
 
 
672 aa  234  4.0000000000000004e-60  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
674 aa  234  4.0000000000000004e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.29 
 
 
640 aa  234  5e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
650 aa  233  6e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  41.13 
 
 
642 aa  232  2e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.6 
 
 
712 aa  231  2e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  45.21 
 
 
624 aa  231  3e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
658 aa  231  3e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.89 
 
 
712 aa  231  3e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  38.23 
 
 
568 aa  231  4e-59  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
541 aa  231  4e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41 
 
 
716 aa  231  5e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
552 aa  231  5e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.89 
 
 
629 aa  230  7e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  41.88 
 
 
638 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  39.61 
 
 
640 aa  227  4e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.76 
 
 
681 aa  227  5.0000000000000005e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.62 
 
 
642 aa  227  6e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  40.91 
 
 
633 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  43.49 
 
 
679 aa  225  2e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.78 
 
 
637 aa  225  2e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  41.71 
 
 
640 aa  225  3e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
572 aa  224  3e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.43 
 
 
640 aa  223  8e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
541 aa  222  1.9999999999999999e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  39.39 
 
 
628 aa  222  1.9999999999999999e-56  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  40.93 
 
 
541 aa  221  3.9999999999999997e-56  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  38.59 
 
 
548 aa  221  3.9999999999999997e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.05 
 
 
619 aa  220  7e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  40.45 
 
 
639 aa  220  7.999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  40 
 
 
638 aa  219  1e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  40.91 
 
 
628 aa  219  1e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_2237  histidine kinase, HAMP region: chemotaxis sensory transducer  29.32 
 
 
661 aa  219  1e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.551171  normal  0.645339 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
645 aa  219  1e-55  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_004578  PSPTO_2472  methyl-accepting chemotaxis protein  29.68 
 
 
661 aa  219  2e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.256702  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
541 aa  219  2e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
547 aa  219  2e-55  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  31.94 
 
 
621 aa  218  2e-55  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
646 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
638 aa  218  2.9999999999999998e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.82 
 
 
676 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
638 aa  218  2.9999999999999998e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  39.16 
 
 
653 aa  218  4e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  40.74 
 
 
638 aa  217  5e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
638 aa  217  5.9999999999999996e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
639 aa  217  5.9999999999999996e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.89 
 
 
647 aa  217  7e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
573 aa  216  9e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
645 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
645 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
552 aa  216  9.999999999999999e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
640 aa  216  9.999999999999999e-55  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.1 
 
 
523 aa  216  1.9999999999999998e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
645 aa  214  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
638 aa  214  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
620 aa  215  2.9999999999999995e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  39.48 
 
 
653 aa  213  7e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
643 aa  213  9e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  36.54 
 
 
558 aa  213  9e-54  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
639 aa  213  1e-53  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
544 aa  212  1e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
634 aa  213  1e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
555 aa  213  1e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
639 aa  213  1e-53  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  40 
 
 
541 aa  213  1e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>