Gene VC0395_0207 details

Gene Information

• Locus tag: VC0395_0207
• ID: 5133962
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 239042
• End bp: 241042
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640530530
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_001215048
• Protein GI: 147671631
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.152775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATCATG AGGATAGGTT CATGGGTTTA TCTATCGTGC AGCGCATTAT CGCTGGCTTC 
GTATTGATGC TCCTGTTGTT AATCCTATTA GGTGTCATTA GTACTTTGAA AATCCGCGGT 
ATTAACGATG GGTTATCAGA AGTGTCAGAT CGAGCCACAC CTTTAGTGAT GGCGGTTGCG 
GGTCTTAAGG AAGCGTTACA AGAGAGCAAC CGTTGGGTGC TGGAATTTCG CACTAGTGAA 
GAGGCTGGTG AGCTCCCCCA ACTGTCGAAC AAGTTCAAAG ATCAGCAAGC ACGCTTTCGA 
CAATTGAGTC AGCAAATGAA CGCATTGACG GATTCAACCG AGAGCCAAAA GCAGTTCCAA 
GATGTGTTAC AGGCCACCAA TCAGTTTTAT AGCCAAGCGG ATCAAGTACT GACTCAACAT 
AGTGAATGGG TGAATGCGCT GGCGCAGCGT CGCAAATTAG AAATTGCCTT TATTCGCTTA 
GAGGATACCT ATCAATGGGC CGCCGATTTG TTATTACAAC AGAGCTCGGG TCAACGTTCG 
ATGCGTAACA AAGCTGAGCT GATCACGTCT GGAATTGCCC GCGATTTAAA AAATATTCGC 
CGAGCGGATG CCAAGACAGA TTTAAATGAA CTGGAAAAAG TTCTGAGTAA AGACATCGAA 
ATGGCGAGAA AACGACTCGA TCGTGTATTG GTTCCTGACG ATGTAAAAGC GCGCTACATC 
GCAAACCTCA ACCGCCTACA AGAGCTCGCT TTGGGCCAAA ATGGTTTGCT GGCAACCATG 
CGTAAAGCGC AGCAGTTGGA AAATGCTCTG CTCATTCAAA ACCAACAGGT CGATGCCAGT 
CTTGCCAGTA GCTTAGCGAA ACTGGATGAC ATGGCGAAAT ATGCCGGCTC AATTGCTCAG 
CAAAGTCGTA TGCTGGCGGA TGCTGCGGTG AGCAGTGCGA ATTTCTGGAT TATGGCGGTC 
TCGGCGATTT CTGCTGCTGT TGCGTTAGTG ATTGGTTACA CCACGGCGCG CAGTATTCAA 
AAGCCGTTGC AAAAAATTAA TCACGAGCTG GCTTATATGG CTCGAGGCGA TATGACACGG 
CGCATTAACT ACCCAACTCG TTGCGAGTTT GGGGCGCTTT CTCGTTCAAT TGACATTCTG 
GCGGACAAAA CCGGTGAGCT GCTGTCACAA ATCAACGCCG GTTCACGCCA TCTGGTGAAT 
GAAGCAAGCC GCTCAGCGGA GATCAGTGAA CGCGCTATGG CGCGGGTGCA AGAACAAAAG 
AGCCAAACCG ACCAAGTGGC AGCGGCCATT ACAGAGCTTG AAGTCAGTGC CACCGAAGTA 
GCGCGTTCAA CCGATGGTGC GAAAGACGAG GTGGATCGCG CGGATGCAGA AGCAAAACAA 
GGGCGTCAAA AGGTCGCCAC GACACGTCGT ATTACCGAGC AGTTAGCGAG TGATATGGAA 
TCGGCCGTGG GCATTACCCA TAAACTGGGC GAGTTTAGTA ATAACATTGG CAGTATTTTG 
GATGTGATCC GCGGTATCGC CGAGCAAACC AATTTGTTGG CACTCAATGC GGCGATTGAA 
GCCGCGCGTG CCGGAGATGC CGGACGCGGT TTTGCGGTGG TGGCGGATGA AGTTCGTGCT 
TTGGCTACGC GCACTCAAAC CTCGACCGAA GAGATCCAAC ATATGATTGA GAACTTGCAG 
GAGTCGAGTA AGCAAGTGGT CGAAGTGATG GGGCGCAGCC AAGAGCAAAC TCGTGCTTGT 
GTTGAGCAGA CAAGGGAAAT GGATTCTGCG CTGCAATCGA TCGCTGATCG TATGGGAGCG 
ATTAAAGAGA TGGCCGATCA AGTTGCCCAT GCGGCGCAAG AGCAAATCGT AGTCAGTCAA 
AGTGTTGCGC ACCATGTAAC TGGGATTGCA GAAGTTGCCC ATGAAACGGA GCGTGAAGCG 
CGTGAATCCG CCAACAGCAG TGAAGTGTTG GCTGATCTTG CAGCTAAGCA GCAACAACTC 
ATTGCACACT TTAAGGTCTA G 

 

Protein sequence

MNHEDRFMGL SIVQRIIAGF VLMLLLLILL GVISTLKIRG INDGLSEVSD RATPLVMAVA 
GLKEALQESN RWVLEFRTSE EAGELPQLSN KFKDQQARFR QLSQQMNALT DSTESQKQFQ 
DVLQATNQFY SQADQVLTQH SEWVNALAQR RKLEIAFIRL EDTYQWAADL LLQQSSGQRS 
MRNKAELITS GIARDLKNIR RADAKTDLNE LEKVLSKDIE MARKRLDRVL VPDDVKARYI 
ANLNRLQELA LGQNGLLATM RKAQQLENAL LIQNQQVDAS LASSLAKLDD MAKYAGSIAQ 
QSRMLADAAV SSANFWIMAV SAISAAVALV IGYTTARSIQ KPLQKINHEL AYMARGDMTR 
RINYPTRCEF GALSRSIDIL ADKTGELLSQ INAGSRHLVN EASRSAEISE RAMARVQEQK 
SQTDQVAAAI TELEVSATEV ARSTDGAKDE VDRADAEAKQ GRQKVATTRR ITEQLASDME 
SAVGITHKLG EFSNNIGSIL DVIRGIAEQT NLLALNAAIE AARAGDAGRG FAVVADEVRA 
LATRTQTSTE EIQHMIENLQ ESSKQVVEVM GRSQEQTRAC VEQTREMDSA LQSIADRMGA 
IKEMADQVAH AAQEQIVVSQ SVAHHVTGIA EVAHETEREA RESANSSEVL ADLAAKQQQL 
IAHFKV