Gene CPS_4528 details

Gene Information

• Locus tag: CPS_4528
• ID: 3523245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4781655
• End bp: 4783673
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637286968
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_271176
• Protein GI: 71277838
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAA CTGTAGCTGT AAAAATAATT GGTGGCTTTG CCATCATCTC AACTTTACTG 
ATAGTCATTA GTACCATATC GTTATCTAAT TTAAGCACCA TCAGCGAGTC GACTCAGCAG 
CAGAACACAT TAGCTATTCC AACACTCAAA GCCAGTAATA AACTTGCTAT TGAGATCAGT 
CAGATGAGTA ACTTAACCTT GAAAGGTTAT TACCAAGAGG ATCATGCTCT ATTAGCCGGT 
AACCTTAATA ATTATAAAAA GATAGAAACA GTATTCGCGC AGCAATTATC AGAATTAAAA 
CAAATTGTCG CCTCTGAACA AGATTTATTG ACGAACTTGA CTCAAGTAGA CCAGCTATAT 
TCGAATTTTA ATAATGCGAG TATTGAATTG TTTAACAATC GTAAAATTTC TATTGAACAA 
AAGCAGCTAT TGACTGAGAA GATTGATATT TTAGAAGAAA AAGCCGATAA CACTATTATG 
TTACTGCTAG ATTTGGCTGA CCATGAACTC GCAGATACCA AGCTTCAGCG GGCAATTAAT 
TTAAGTGACT ACTTCGAGAA TCAGTTGAAC TCGATTGTTT CTTCCGCTCT AGAGTATCGT 
GATATCTTGA ATGAAAGCAC AGCAGAGTTT ATTGGTAGTG AGCTTACACG TAGTATTAGT 
GATGCAAGAC AATCAGTTGA TAATATTACC TTTGAATTAA ATAGCCATGA AATTAAAGAC 
ATCTCAGAAC AAGTGACCTT AGCGTTCAAT GAAATAGAAA GTCTTTTATC ACAAGAAAAT 
GGCATCATAG CCCACAAAAA CAAGCAGTTA AAATCTAATC GACAAGCTTC TCTTATGCTC 
TCACAGGAAG AAAAGGTAGC TAAGCAAGTA AATAGAATAT TAGATAAGCA ACTTGAACTA 
GCTAACCAAA CAACGATAAC TTCCAGTCAA CTAATCGAAG ACTCAGTAAG CAATGGCACA 
ACTCATACAA CCATTATTAT GCTCATATCA ATTGCTGTTG CGCTCATAAT TGCTCGAATT 
ACACTTATTG GTATTACACG TCCGTTAGCA CGAGTTAATG AAATGCTAAG TATTGTGGCC 
TCTGGTGATC TTTCGTTGAA ACTAGATGAA AGTGGTAAAG ATGAATTCGC TCAGTTATCA 
AAAAATTGTA ATTTATTAAT CGATAGTTTA CGTAACCTGA TTGAAAGTAT AGTCAATCGC 
TCAGCGCAGT TAGCTGCTGC TGCAGAACAA ACCTCAGCAG TTACTGCACA AAGTACCACT 
GCAATTGAAG AACAGCGTAA TCAAGTAGAA CAAGCCGCTT CGGCGACAAC AGAAATGAGC 
AGTACCTCAC AAAGTGTACT TTCTAGTGCA AATGATGCTT TAAGCGAAAT TAAACATGCA 
GATGAAGAAG CTGAACGTGT TAAAGGTATT TCAGCTAGGA ACCGTCAGAC CATTGAAATG 
CTTGCTAATG AAGTAGAATC CGCCTCTCAA GTTATCAATC AATTACAACA AGACAGTGCC 
TCAATTGGCG GAATATTAGA TGTAATTCGT GGTATTGCTG AGCAAACTAA CTTACTGGCA 
TTGAATGCTG CTATTGAAGC AGCAAGAGCT GGTGAGCAAG GACGAGGCTT CGCTGTCGTT 
GCAGATGAAG TTCGAACACT AGCAAGTAGA ACACAAGAAT CAACGTCTGA AATCCAAACA 
ATGATAGAAG CACTACAAAC GGGCGCTGGA AAAGCTGTAA CCGTAATGGA TGCAGGTAAA 
TCTAAAGCAA GTGATTGTGT AAATCAAAGT GAGGAAGCTG ACCAAGCTCT CGAAACAATT 
ACTCATGCTG TACACGAGGC ATTCGATCGC AGCTCGCAAA TTGCAACAGC CGCTGAAGAG 
CAAAGTGTTG TTGCCCATGA AATCAGTGAA AACCTTGAGT CCATTGTGAC TATTGCCGAG 
CAAACAACCG CGGGTTCACA ACAAACAGCA GCATCAAGTA GTGAAGTTGC TCGTTTAGCT 
GAAGAGTTAC AGCAATCAGT ACAAAAATTT AAATTATAG 

 

Protein sequence

MNLTVAVKII GGFAIISTLL IVISTISLSN LSTISESTQQ QNTLAIPTLK ASNKLAIEIS 
QMSNLTLKGY YQEDHALLAG NLNNYKKIET VFAQQLSELK QIVASEQDLL TNLTQVDQLY 
SNFNNASIEL FNNRKISIEQ KQLLTEKIDI LEEKADNTIM LLLDLADHEL ADTKLQRAIN 
LSDYFENQLN SIVSSALEYR DILNESTAEF IGSELTRSIS DARQSVDNIT FELNSHEIKD 
ISEQVTLAFN EIESLLSQEN GIIAHKNKQL KSNRQASLML SQEEKVAKQV NRILDKQLEL 
ANQTTITSSQ LIEDSVSNGT THTTIIMLIS IAVALIIARI TLIGITRPLA RVNEMLSIVA 
SGDLSLKLDE SGKDEFAQLS KNCNLLIDSL RNLIESIVNR SAQLAAAAEQ TSAVTAQSTT 
AIEEQRNQVE QAASATTEMS STSQSVLSSA NDALSEIKHA DEEAERVKGI SARNRQTIEM 
LANEVESASQ VINQLQQDSA SIGGILDVIR GIAEQTNLLA LNAAIEAARA GEQGRGFAVV 
ADEVRTLASR TQESTSEIQT MIEALQTGAG KAVTVMDAGK SKASDCVNQS EEADQALETI 
THAVHEAFDR SSQIATAAEE QSVVAHEISE NLESIVTIAE QTTAGSQQTA ASSSEVARLA 
EELQQSVQKF KL