| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2609 |
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| Symbol | |
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| ID | 4604856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3124600 |
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| End bp | 3126465 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639782020 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928481 |
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| Protein GI | 119775741 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.206567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATTC GTCAAAAATT AATGCTGAGC GCAGCGTTGT CGATAGGTGC CCTGGTGGCG
ATGTTCGGTT TGCAGCTGTA TTCCGGCAAA ACTCAGGTTG AGTTGGCGTT GGCCGCTCAA
ACCGTGGTTG AACTGGAAAG GGACATGCTC GAGCTTCGCA AGGATGAGAA AGACTTTTTA
ACCCGCAGTG ATATGGCCTA TGTTCAGGGG CATGCCCAAC ATGCTGCAGA GCTCAAAACC
AAACTGAGCA CTGTCAAGCA AGTATTTGAA AAATATGACA TGCCCATGGC GCCTTTGGAT
CGGTTTGAGA GTTTGTTAGG CCAATACCTG ACACTGTTTT CCGACGTGGT CACACTACAG
CAGCAAATTG GTTTGACCCC CAAGTCCGGC TTGTATGGCC AGCTCAGAGA GGCGGTACAC
AATGTGGAAA CCCTACTGAA AGAACACAAT AAGCCAGAGC TGGCAGTACA GATGCTACAA
CTGCGTCGCA ACGAAAAAGA TTTTATGTTA CGCCGTGATG CCGGTTATCT GGATAAGTTT
CAGCAAACTC TGCGCAGCTT TGACAGCACC CTTGATGGGT CCGATTTGAG TCCTGACGTC
GCGGATGAAA TCCGTCGCCT CATGAAGGAT TATCAAATGA ATTTCGAGGC CTTGGTTAAT
AAAGAGAAGG AATTTGGTCT GGGCAAAGAG GACGGCAAAA TGGGCGCGCT CAGGTCTGTC
ATCGACCAGT CTGAGCAGGC GACACAGGAG CTGCGGGAGC TTGCGCTTCA TGAAATTCAT
GATGAAGAGG GTGACAGTGT TGCCATGGCG ACAACCCTGT TTGCCGTGAT TGCTGTGCTG
GTTGCTATTG TGACCTTTAT GATCATCCGC GCCATCATTA CCCCCATCAA CAATATCAAT
CAGGTGATTT CACATGTTGG CAAGGATAAA AACCTGACCC TGCGTTGCGA TACACAAGGG
GGTGACGAAA TCGCTGAAAT AGGCCAGCAC TTTAACGAAA TGGTTGAAAG TTTCCGTGCG
CTTATCCAGC AAGTAAACGA TGCTGTGAAC GTCATGAATG AATCCTGTCA GGAGCTGTCA
GCCAATGCGA CCCAGGCGTC CGACGGGGTA CTTAGGCAGC TGAATGAAAC CGACATGGTA
GCTACCGCCA TTACTGAGAT GGGGGCCACC ATCGATGAGA TTGCCAAAAA CACCGAACTG
GCGGCCGAGC GTGCCAACCA TACACACACC AACGCTCAGG TAGGACAGCA GAGCGTTGAG
CAAACCATCG AAAAAATCCA GTCACTGGCG CAGCAGCTTA ACAATTCGGC CTCTGTGGTG
GCTGAGCTTG AGCGTGACAG CGGCACCATA GGCAGTGTGC TGGATGTGAT CCGGGGTATT
GCTGAGCAAA CCAATCTACT GGCCCTGAAC GCTGCCATTG AAGCCGCCCG TGCCGGTGAG
CAGGGGAGGG GCTTTGCCGT GGTGGCCGAT GAGGTCCGCT CGCTGGCGAT GCGAACACAG
GAGTCGACCG AAGAAATCGC CGGTATTATC CAAACTCTGC AAAGCCGCAC CCGCTCCATT
GTGCAGCTGA TGGAAGCCAG TCAGCGCCAG GGCGGAGAAA GCGCTGAGCA AGCTGCCAGT
GCCGGTACCA TGTTGGCGCA GATAAATCAG GATGTGACCA ACATTATGGA CATGAGTACC
CAGATAGCCG CGGCCATCGA AGAGCAAAGC TCTGTGGCGG CAGAAGTGAA TAAAAATGTG
GTGGTTATCA GGGATATCGC CGAAGAATCT TCCCATGCGG CTATGGCGAA CGCTAAAGCC
TCCGACGATG TGCGGGAACG GGCTGAGTAT TTGCAGAGGG CAGTTAGCCA GTTCCGCGTG
AGTTGA
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| Protein sequence | MLIRQKLMLS AALSIGALVA MFGLQLYSGK TQVELALAAQ TVVELERDML ELRKDEKDFL
TRSDMAYVQG HAQHAAELKT KLSTVKQVFE KYDMPMAPLD RFESLLGQYL TLFSDVVTLQ
QQIGLTPKSG LYGQLREAVH NVETLLKEHN KPELAVQMLQ LRRNEKDFML RRDAGYLDKF
QQTLRSFDST LDGSDLSPDV ADEIRRLMKD YQMNFEALVN KEKEFGLGKE DGKMGALRSV
IDQSEQATQE LRELALHEIH DEEGDSVAMA TTLFAVIAVL VAIVTFMIIR AIITPINNIN
QVISHVGKDK NLTLRCDTQG GDEIAEIGQH FNEMVESFRA LIQQVNDAVN VMNESCQELS
ANATQASDGV LRQLNETDMV ATAITEMGAT IDEIAKNTEL AAERANHTHT NAQVGQQSVE
QTIEKIQSLA QQLNNSASVV AELERDSGTI GSVLDVIRGI AEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRSLAMRTQ ESTEEIAGII QTLQSRTRSI VQLMEASQRQ GGESAEQAAS
AGTMLAQINQ DVTNIMDMST QIAAAIEEQS SVAAEVNKNV VVIRDIAEES SHAAMANAKA
SDDVRERAEY LQRAVSQFRV S
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