Gene Sden_2638 details

Gene Information

• Locus tag: Sden_2638
• ID: 4019155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 3166995
• End bp: 3169022
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637956682
• Product: chemotaxis sensory transducer
• Protein accession: YP_563640
• Protein GI: 91793989
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAGA TAACAATCAA ACAGAAAATT GCCATAGGGT TTGCATCAAT AGGACTGTTA 
TTGCTTGCTG GGACAAGCTT TTTCTATTCA TCCTTAACCA AAATCCAAAC AGCCAATTAT 
AATATTGAAA CACTGGCAGT GCCTGTTCAA CAGCAAAGTA ACCAGTTACA ACTGGCATTA 
CTTAAAATGG CCAAGCTCAA TAGCCAAGCC TTTGCCCAAT CCAAACGAGT TAACATAGAG 
GCAAGTCTTG CCGAGTACCA GACAATACAT TCCCAATATC AACAGATCCA GACTGAACTT 
GCACAAAAAG TGTCAGATCA AACTCAGATG CAAACCGCAT TAGCCAAAGC CCAAGAGCAT 
TTTTTAGCCT ACTCACAGTA CACAAATAAT ATGTTTACTG AAAAGCTTGC CATTGATGCC 
GCTATCGAAG CCTTTAAAAC CTTAGACAGT AATTTCAAGC AAGCCAGAAC AAATGCCAGT 
AATGCCATGA TAGATTTAGA GATCATTGAT GCTGGCGATC AAGCAGCCCT GTTAAATGAT 
GTTATCGCGA CGGGAACGCG GGTCGATGAT ATGTTGTACA CCTTAGGCAA TTCATTGATG 
GATCTTGGCC GCATAAAGCA AATGGATGCA CTGCAAACCC ATAAACAAGA CGTGGGCTTT 
TTACTGAGCA ATATCCGAAG TAATTTTGAT TATCTCAAGC AGCAAGCCTA TGGTTTGCCC 
GCCGACGATA CCTTAGCCCA ATTTGACACT GAGCTAGTGT TGATTCTTAA GTTGCTCGAG 
ACACCTGGGG AGCTTTATTT AGCTCAAGAG CAAGTGATCA AAAACCAGCT TGCTGCCGAA 
GTTTCCCACA CTCAAGCCGA CCAAGTATTC AAGAGTAATT TCGCCGCATT AAATCAATTA 
GTCGCCCTTG CTGATAAACG CTTCGAAAAT TTACAGCGAG TGGCCGACGA TGAAATTAAC 
GGCGCTCAGA CCTTAGCCAT GCTAATGACC TTAGTGTTTA TACTCATGGC CAGTTTTATT 
TATTTTTTCA CCTCCAAAGC CATGCTAGGC CCTCTTAACG CCATAAACAA AGCCCTCGCA 
CTCATCGCCA GCGGCGATTT ATCTAAACGC CTGACTAAAC GCAATGAAGA TGAGTTTGGT 
GTCTTGATGG ATAACATGAA TAAACTCAGT GACTCATTAG CGCATTTATT AGAAGGCATT 
AGCCGCGATG CCCACAAGTT AGACACCTCG GCCATCTCAT CGCAAAAACA GGGAGAGAAG 
ATAGCAGCAT CGGCTAATGG CCAAATTAAG CGGGTGAAAC AGGCTCGCGC CCTTGCCGAA 
CAAATACATC ACAGCTCAAA TACTGTGCAC ACCCAAGCCG AAGAATCGGC CAATCAAATT 
TTGTTGGCGT CAAAGCTTGG CTTACAAGTC AAAGGTGTCG CCGACGACAA CCAAAGGATC 
ATTGAAAACC TCTCCAATAA CTTAGGCGAT TCAGTACAAG TCGTCACCCG TTTGAGTCAA 
CACAGCAATA ATATTGGCAG TATTTTGGTG ACCATCAGCG CCATCGCCGA ACAAACCAAT 
TTATTGGCGT TAAATGCAGC CATTGAAGCG GCAAGAGCGG GCGAAAATGG CCGAGGTTTT 
GCCGTAGTAG CGGATGAGGT CAGATCCTTG GCGTCACGCA CTCAATCATC CACGGCCGAA 
ATTCAAACCA TGATTAATGC ACTGCAACAA GAAACTAAAA ATGCAGTAAC GGCCATAGGA 
CAAGGTCAAT CCCAGGCCAG TGATTGTGTC GAGCAGAGTA AGACGCTGCA TGGCTCCATT 
GAACAAATAG AGAACGCCTT GACTCAGATT AACTTAATGA GTCAAAGCAT CAACCAAGCG 
GCTAATGAGC AAGTGAAATT TAGTCAGCAA ATTGAAGATA CCATGATAGA AACGTCGGAT 
GCGGCCGAAC GAAATGCATC CGAGTCCAGT GCCATGGCCA AAGAAAGTGC CGAGTTGAAT 
AACCTCGCCC ACTCACTCAC CACTTCGGTT GAACGATTTA AGCTGTAG 

 

Protein sequence

MLKITIKQKI AIGFASIGLL LLAGTSFFYS SLTKIQTANY NIETLAVPVQ QQSNQLQLAL 
LKMAKLNSQA FAQSKRVNIE ASLAEYQTIH SQYQQIQTEL AQKVSDQTQM QTALAKAQEH 
FLAYSQYTNN MFTEKLAIDA AIEAFKTLDS NFKQARTNAS NAMIDLEIID AGDQAALLND 
VIATGTRVDD MLYTLGNSLM DLGRIKQMDA LQTHKQDVGF LLSNIRSNFD YLKQQAYGLP 
ADDTLAQFDT ELVLILKLLE TPGELYLAQE QVIKNQLAAE VSHTQADQVF KSNFAALNQL 
VALADKRFEN LQRVADDEIN GAQTLAMLMT LVFILMASFI YFFTSKAMLG PLNAINKALA 
LIASGDLSKR LTKRNEDEFG VLMDNMNKLS DSLAHLLEGI SRDAHKLDTS AISSQKQGEK 
IAASANGQIK RVKQARALAE QIHHSSNTVH TQAEESANQI LLASKLGLQV KGVADDNQRI 
IENLSNNLGD SVQVVTRLSQ HSNNIGSILV TISAIAEQTN LLALNAAIEA ARAGENGRGF 
AVVADEVRSL ASRTQSSTAE IQTMINALQQ ETKNAVTAIG QGQSQASDCV EQSKTLHGSI 
EQIENALTQI NLMSQSINQA ANEQVKFSQQ IEDTMIETSD AAERNASESS AMAKESAELN 
NLAHSLTTSV ERFKL