More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_0902 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  65.43 
 
 
674 aa  861    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  85.74 
 
 
673 aa  1130    Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_009438  Sputcn32_0986  methyl-accepting chemotaxis sensory transducer  86.03 
 
 
673 aa  1087    Shewanella putrefaciens CN-32  Bacteria  normal  0.603679  n/a   
 
 
-
 
NC_004347  SO_3642  methyl-accepting chemotaxis protein  90.79 
 
 
673 aa  1125    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  68.05 
 
 
673 aa  884    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  62.37 
 
 
675 aa  795    Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  64.74 
 
 
675 aa  794    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  94.95 
 
 
673 aa  1213    Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  85.59 
 
 
673 aa  1130    Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  65.97 
 
 
673 aa  867    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  100 
 
 
673 aa  1336    Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  60.92 
 
 
673 aa  771    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  86.03 
 
 
673 aa  1132    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  85.88 
 
 
673 aa  1131    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  99.7 
 
 
673 aa  1332    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  64.78 
 
 
673 aa  822    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
674 aa  522  1e-147  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  42.27 
 
 
672 aa  459  9.999999999999999e-129  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  41.42 
 
 
674 aa  457  1e-127  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  28.92 
 
 
672 aa  253  7e-66  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  43.14 
 
 
543 aa  252  2e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.13 
 
 
637 aa  251  2e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  42.24 
 
 
637 aa  251  4e-65  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  31.64 
 
 
666 aa  249  1e-64  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
674 aa  247  6.999999999999999e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
572 aa  245  1.9999999999999999e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
636 aa  243  6e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44 
 
 
679 aa  243  9e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
640 aa  240  5e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
552 aa  240  5.999999999999999e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  40.7 
 
 
640 aa  239  1e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
541 aa  239  1e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  40.11 
 
 
642 aa  239  2e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.69 
 
 
681 aa  238  2e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.42 
 
 
629 aa  238  3e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  41.73 
 
 
640 aa  237  4e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
638 aa  237  7e-61  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
638 aa  236  1.0000000000000001e-60  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
564 aa  236  1.0000000000000001e-60  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  41.86 
 
 
676 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
638 aa  235  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.46 
 
 
640 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.4 
 
 
642 aa  234  4.0000000000000004e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.96 
 
 
559 aa  233  7.000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  42.61 
 
 
639 aa  233  7.000000000000001e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.86 
 
 
638 aa  231  2e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.68 
 
 
634 aa  230  8e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
638 aa  229  1e-58  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.89 
 
 
619 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
573 aa  228  2e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  41.48 
 
 
544 aa  228  4e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.33 
 
 
633 aa  227  5.0000000000000005e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
438 aa  227  7e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  42.32 
 
 
650 aa  226  9e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
634 aa  226  9e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  39.15 
 
 
653 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007954  Sden_2638  chemotaxis sensory transducer  29.5 
 
 
675 aa  226  1e-57  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.24 
 
 
712 aa  224  3e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
634 aa  224  4.9999999999999996e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
639 aa  223  8e-57  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
573 aa  223  8e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  39.71 
 
 
653 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  40 
 
 
634 aa  222  1.9999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.04 
 
 
624 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.97 
 
 
713 aa  221  3e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
547 aa  221  3e-56  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.68 
 
 
712 aa  221  3.9999999999999997e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  41.54 
 
 
647 aa  221  3.9999999999999997e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
639 aa  221  3.9999999999999997e-56  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
658 aa  221  5e-56  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
716 aa  221  5e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
639 aa  219  1e-55  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  39.77 
 
 
555 aa  219  1e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
552 aa  219  1e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  40.84 
 
 
541 aa  219  1e-55  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  43 
 
 
647 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  40.51 
 
 
638 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
638 aa  218  2.9999999999999998e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
639 aa  218  4e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  38.57 
 
 
568 aa  217  5e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
639 aa  217  5e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  217  5.9999999999999996e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
572 aa  216  7e-55  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  216  9e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  216  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  28.67 
 
 
675 aa  216  9.999999999999999e-55  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
675 aa  216  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  39.04 
 
 
543 aa  216  9.999999999999999e-55  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  37.5 
 
 
543 aa  216  9.999999999999999e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  216  9.999999999999999e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
541 aa  215  1.9999999999999998e-54  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
541 aa  215  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
541 aa  215  1.9999999999999998e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
653 aa  215  1.9999999999999998e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
540 aa  215  1.9999999999999998e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
714 aa  215  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
541 aa  216  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.99 
 
 
548 aa  215  1.9999999999999998e-54  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008345  Sfri_1215  methyl-accepting chemotaxis sensory transducer  28.26 
 
 
678 aa  215  1.9999999999999998e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1386  methyl-accepting chemotaxis sensory transducer  27.76 
 
 
675 aa  214  2.9999999999999995e-54  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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