Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_67010 |
Symbol | |
ID | 4383384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5980339 |
End bp | 5982282 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639328005 |
Product | putative chemotaxis transducer |
Protein accession | YP_793541 |
Protein GI | 116053219 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGATT GGTGGGTTCT CCAACTGGCC AAGCTGAGCG TCAGCCGCAA GCTGATGGTC GGTTTCGGTG TCCTCCTCGC GCTGCTTCTG CTGGTGGTGA TCAGCAGCAA CCGCACCCTC ACGCACCAGA CCGCCCTCAG CGAGCAGCTC GCCGAAGTCG CCAGCCTGAT GGAACAGGCC CAGCAAGCCG AACAAAGCCG CCTGGCATTC GAAGCCGGCA GCGACCCGCG CCAGGCCGAG CAGGTCCGCC AGACCCTGGC CGGGATGCTC CAGCGCCTGC AGGCGCTGCG CCACAGCGAG CTTGACCCGG CCGCCCTGGC CCACCAGGCC GAAGCCATCG AAGCCTACCG CAAGGCCTTC GACGACCTCG CCGCAGCCGA TCAGCAACGC AGCGCCGCCC GTGGTGTGCT GGTGGGCACT GCACAGCAGG CGCTGGACAG CTTCGCCCGC CTCGAGGAAC TGATGGACGC CAGCCTCGCG CAGCAGGCCG GCGACCCGCA GGCCTTGCAA CGCAGCCGTG CGGTGGCCGA CCTGCACCAA CAGTTGCTCA TGGTGCGTTA CCAGGTGCGC GGCTACGTCT TCGAGCGCAG CGACAAGGCC GAGCAGGCCG CGTTCGCCGC GTTCGACGCC CTCCGCCAGG CCGCCACGAC GCTGCGAGGC CAATTGCCCG GCGAGGCCGA TGCGGCGCTG GAACAGGCCA TGGGCAGCCT CCAGGGCTAT CGTGGCGGCA TCGAGCAGTT CCGTGCCGGC GTCGTCCGCA CGCGCCAGGC GCAGCAAGCG ATGCAAAGCA GCACCCAGGA TATGGCCCGG GCCGGCCGGA CCCTCACCGA AGCCGGTCGC CAGTTGCGCG AGAGCACCGC CAGCCGCGAC CGCGCCAGCC TCTGGCTGAT CGCCGCGCTG GCCCTGGCCT TCGGCTGCGT CGCCGGCTGG GCGATCAACC GGCAGATCGT CCGGCCGCTG GACGAAGCCC TCGCGCAGGC CGAGGCCATC GCCGCCGGCG ACCTCGGCAA GCGTTCGCAG AATCCCCTGA CCCTCCAGCG CCGCGACGAA CTGGGCCAGT TGCAGCGAGT CATGCAGCGC ATGGGCGACA GCCTGCGCGA GCTGGTCGGG CGGATCGGCG ACGGCGTCAG CCAGTTGGCC AGCTCCGCCG AGGAACTCTC GGCGGTCACC GAGCAGACCC GCGCCGGGGT CAACAGCCAG AAAGTGGAGA CCGACCAGGT CGCCACCGCC ATGCACGAGA TGGCCGCCAC CGTGCAGGAC GTCGCGCGCA ACGCCGAGCT GGCCTCCCAG GCCGCTCGCC AGGCCGATGA AGAGGCGCGC CAGGGCGACG CGGTGGTCGA CCAGGCGGTG ACGCGCATCG AGCGCCTGGC TACCGAAATG GACGTTTCCA GCGAAGCCAT GGCGCGCCTG AAGAACGACA GCGAGCAGAT CGGCAGCGTC CTCGACGTGA TCAAGTCGGT GGCCGAGCAA ACCAACCTGC TGGCGCTCAA CGCCGCCATC GAAGCGGCAC GCGCCGGCGA CGCCGGACGC GGCTTCGCGG TGGTCGCCGA CGAGGTCCGT GGCCTGGCCC AGCGCACCCA GCAGTCCACC GCCGAGATCG AGGGCCTGAT CCAGCGTCTC CAGCAGGGCG CCGGTGAAGC CGCCGAACGC CTGGAGAACA GCCGCTCGCT GACCGCCAGC ACGGTGGAAC TGGCGCGCCG CGCCGGCGCC GCGCTGGACA GCATCACCCG CACCGTCTCC GACATCCAGA ACATGAACCT GCAGATCGCC ACTGCCGCGG AGCAACAGAG CACGGTGGCC GAGGAGATCA ACCGCAGCGT CCTCAGCGTG CGCGACGTCG CCGAGCAGTC GGCCGCCGCC AGCGAGCAGA CCGCCGCCTC CAGCGGCGAG CTGGCGCGCC TGGGCACGCA GTTGCAGGCG CAGGTGGGAC GCTTCCGCCT GTAA
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Protein sequence | MYDWWVLQLA KLSVSRKLMV GFGVLLALLL LVVISSNRTL THQTALSEQL AEVASLMEQA QQAEQSRLAF EAGSDPRQAE QVRQTLAGML QRLQALRHSE LDPAALAHQA EAIEAYRKAF DDLAAADQQR SAARGVLVGT AQQALDSFAR LEELMDASLA QQAGDPQALQ RSRAVADLHQ QLLMVRYQVR GYVFERSDKA EQAAFAAFDA LRQAATTLRG QLPGEADAAL EQAMGSLQGY RGGIEQFRAG VVRTRQAQQA MQSSTQDMAR AGRTLTEAGR QLRESTASRD RASLWLIAAL ALAFGCVAGW AINRQIVRPL DEALAQAEAI AAGDLGKRSQ NPLTLQRRDE LGQLQRVMQR MGDSLRELVG RIGDGVSQLA SSAEELSAVT EQTRAGVNSQ KVETDQVATA MHEMAATVQD VARNAELASQ AARQADEEAR QGDAVVDQAV TRIERLATEM DVSSEAMARL KNDSEQIGSV LDVIKSVAEQ TNLLALNAAI EAARAGDAGR GFAVVADEVR GLAQRTQQST AEIEGLIQRL QQGAGEAAER LENSRSLTAS TVELARRAGA ALDSITRTVS DIQNMNLQIA TAAEQQSTVA EEINRSVLSV RDVAEQSAAA SEQTAASSGE LARLGTQLQA QVGRFRL
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