| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0922 |
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| Symbol | |
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| ID | 4923214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1047740 |
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| End bp | 1049458 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162454 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001093052 |
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| Protein GI | 127511855 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.981358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC ACAAACGCCA GGAGGCACAT GAGATGACGG CAGCGTCCAC CCAGGGATCA
GGCTTGATGG AGCGGATCAA GTCGGTAAGA TTTCAATTAA AACTCAATAT CTTCTTAATC
ATCTTCGCCT TCATCTTCCT CGGCTATAAG GGGATCACCG GTATGTTGGA TGCGGGATAT
GCCATAGGGG ATCTCTACGG TCAGGGTATG CAGCACAGCA TCCGGGCCGG TAAGGTGCTC
AACGAGCTGG AGAAGGCCCG CAGCGGATTG CTGCTCGGCT TTCAACATGA TCCCGCCAAC
GCCTTTGCCG ACATGCACAA CCACCCCCTG AGCTTCCATA TCGATGCCAG CCGGGCCTCG
ATTAAGACGC TGCACGACAT TATAGATAAT CAGATCTTGG CATCGGATCT CGCCGACGAT
GAGCGCGCCG AGGTCAATCG CCTGGTGTCG CTATTGGACA AGGTTACTCA GGAGGGCTTT
AACCCCGCCA TCCAGGCCTT GAGTCAGGGA GAATATAAAC GCTCCAATCA GTTGCTGCTC
GAGAAGATTA ACCCCCTGTT TAAGGATATC ACCGACCAGG CCCAGGCCTT CCTGGATATG
CAGATCGCCG AGGCTAAGAC TAGCTATCAG GCCTCACAGG AGACCGTCTC CCTCTACATC
TGGCTGGTGG CCATCTTCTC TGGCGTCGCC ATGCTTGCCA TCAGCGTCAG CTCGGTATTT
ATCATTCGCC GGGTGAGCCT GTCTGTGGTG CAGCTGGAAG AGACGGCGGT GGATATCGCC
GCTGGCGATC TCACCAAGCG TATTCGCCTC GGCGGCCACG ATGAATTTGC CCATATCGCC
GAGCATGTGA ATCGCATCGC AAGCGATTTC CAGCAGGCGG TGACCAACAC CCACGCCTCG
ACCTCACGCC TGGCCAGCGC GGCGGAAGAG AATGCCGTGG TATCGACTCA GACCCAGCGC
AACGTGCTGG ATCAACAGCA GCAGACCCAG CTGATCGCCA CCGCCATCCA TGAGTTTACC
GCCACTGTGC GTGAGGTGGC TCAGAGCGCT GCCTCGGCCG CCACCGCCTC CCAGGATGCC
AACGGCGCCG CTCACGGCGC CCAGGGCGTG GTGGATGAGA GTATCGCCGT GATTGAGGCG
CTGGCGCAGG AGCTGAGCCG AGCCAGCGAG GCGATGACAC TACTAGCCCA GCATTCCAAT
GAGATAGGCA CTGTGGTGGA TGTCATTCAG GCGATCTCCG AGCAGACCAA CCTGCTGGCG
CTGAACGCGG CCATCGAGGC GGCGCGGGCG GGTGAGCAGG GCAGGGGGTT TGCCGTGGTG
GCCGACGAGG TGCGCTCTCT GGCGAAACGC ACCCAGGACT CTACCGAGGA GATCCAGAAG
ATGATCCAGC GCCTGCAACA GGGGGCGCGG GACTCGATGC AGATGATGCA GAGCGGCACA
GAGCAGGTGA AACTCAGCGT GGATAAATCC TTGATGGTTC GTGATGCCCT GCAGCAGATC
TTAAACAGCA TAGAAGAGAT CAACGCCCTC AACGCCCAGA TAGCCACCGC CTCGGAGGAG
CAGAGCTCGG TCACTGAGGA GATCAACATC AATATCACCA ACATCAGCGA GATCTCGGAT
CAGACCGCCG AGGGCGCCAG ACAGAGCAGC GATGCCACCG AGGATCTGGC CAGGCTGGCA
GAATCCATGG AGGCGGATAT CGCCCACTAT AAGGTGTAG
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| Protein sequence | MSEHKRQEAH EMTAASTQGS GLMERIKSVR FQLKLNIFLI IFAFIFLGYK GITGMLDAGY
AIGDLYGQGM QHSIRAGKVL NELEKARSGL LLGFQHDPAN AFADMHNHPL SFHIDASRAS
IKTLHDIIDN QILASDLADD ERAEVNRLVS LLDKVTQEGF NPAIQALSQG EYKRSNQLLL
EKINPLFKDI TDQAQAFLDM QIAEAKTSYQ ASQETVSLYI WLVAIFSGVA MLAISVSSVF
IIRRVSLSVV QLEETAVDIA AGDLTKRIRL GGHDEFAHIA EHVNRIASDF QQAVTNTHAS
TSRLASAAEE NAVVSTQTQR NVLDQQQQTQ LIATAIHEFT ATVREVAQSA ASAATASQDA
NGAAHGAQGV VDESIAVIEA LAQELSRASE AMTLLAQHSN EIGTVVDVIQ AISEQTNLLA
LNAAIEAARA GEQGRGFAVV ADEVRSLAKR TQDSTEEIQK MIQRLQQGAR DSMQMMQSGT
EQVKLSVDKS LMVRDALQQI LNSIEEINAL NAQIATASEE QSSVTEEINI NITNISEISD
QTAEGARQSS DATEDLARLA ESMEADIAHY KV
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