Gene PSPTO_2511 details

Gene Information

• Locus tag: PSPTO_2511
• ID: 1184163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2774360
• End bp: 2776321
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637393884
• Product: methyl-accepting chemotaxis protein
• Protein accession: NP_792323
• Protein GI: 28869704
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.295069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAGAA ATGCTCCTTT GAGTATTAAA TTACTGCTGA TTTTAATGTT TCCCCTGTTG 
GGCTTTCTGG CCTTTGCAGG TATCTTCGTG GCCGACAAAA GCGAGACGTT CGGCGAGAAC 
AGTCTCGCCG TCACCGCCAC CAACGCAGCA CAGAAATTGA GTGATGTCGT CACCACCCTG 
CAGCGCGAGC GCGGGGCCAG TGGCGTGTTT CTGGGCAGCG GCGGCAAGTC CATGCAAGAC 
AAGCTGAAAA CCTTTCGCCA AGAAACAGAC AAGGCGATGG GCGAGATGCG GGCGCAATCG 
ACCCAGGATA TTCCAGGCAC GGCCAACGTG CTGCGTGCAC TGGATGACGT GATCGCGCTG 
CGCCTCAAGG TGGATGGGCT GGCGATCAAC AATACCGAGT CCGGCACCCG TTTCACCGAT 
ATCATCAAAA CGCTTATCGG CTATAACTAT TCGCTGGAAG CCAGTATTGA AGACCCGCAA 
ATACTGCGTG CCTTGAGTTC TCTCAACCAG TTTGTCGACA TGAAAGAGCG CGCCGGGCGC 
GAGCGTGTAT TGCTCGGCCT GGCATTCAAC CAGAATCGAT TCGACGCCGC GCTGTTGTCG 
CGCTTCAGCC GTAACCTGGG GGAGTTCTCA GGTTACTACG AAGCCTTTCA ACGCTGGTCA 
CCGGAAGCTT TCAAGACCAG GTTGAACGAT GTTCTGCAAC AGCCGGGATC ACTTGAAGTG 
GCGCGCCTGC AACGCCTGGG TTTTGATACG CCGCTGGGCG ATCCGCTCAA TATCAAACCT 
GAAGACTGGT TCAACCTGTC CACCAGCCGC ATAGACCTGA TGGCCAAGGT TGAAGCCGAA 
CTGGGTCAGA CCGTTGTGGG CCTGGCCAGT GACGCACGCA GCACGGCGGA AAGCAGCCTT 
TACGTAGCGA TCGCCACGGT TATCGCGATG CTGATCGCAG TGCTTTGGCT GGCCTCGGTG 
ATCATCCGCA ACATCAAGAT CGCCGTTGTC GATGTCAACC GTACGTTGAT TGCGCTATCC 
ACCCGTGACC TCACCGCCAG AACCTGTTAC ACCGGCAAGG ACGAGTTCGG CGAGATCTCG 
CGCAACCTGG ACAACATGGC GCAACAGATC AGCGAAGTCA TCGGCGAAAT CGGCAGCGCC 
ACCGCACAGG TCGCCACCGC CGCCGAGCAG TCTTCATCGG TCGCTTTGCA GACCAGCCAG 
AACGTGGCGC AACAACGCCA GGGCACTGAT CAGGTCGCCA CTGCAATCAG CGAGATGAGC 
GCTACCGTCA AAGACGTTGC ACGCAGCACC ACCGACGCTG CCGCGATGTC GCAGCGGGTC 
AACACCAGCA CGGTGCAGGG CAAGGCCGAG ATCGAAAACA CCATCAGCCT GATTCAAGGG 
CTGTCGCTTC AGGCAGAGCA GACCTCGCAG ATCATTGGCG AGCTCAAGGG CGAGAGCAAC 
GCCATCTCCT CGGTGCTCGA TGTGATTCGT GGTGTCGCCG ACCAGACCAA CCTGCTGGCA 
CTCAACGCAG CCATCGAAGC CGCGCGCGCA GGCGAGCAGG GGCGTGGGTT CGCTGTGGTT 
GCCGACGAAG TGCGCAACCT TGCGAAAAAA ACGCAGGAGT CTACGGTCAG CATTCAGAAC 
ATGATCGCCA ACCTGCAGTC CGGCTCCGAA CGCGCCGCTA CGTCCATGCA GGAAACCCTG 
GGTAAAGCGC AGGCGGGTGC CAGTAGCGTA GTGCGCGCCG GCGAACTGCT GGAAGAAATC 
GCCGAAGGCA TCGCCAGCAT CAGCGACCGC AACATCCAGG TTGCTTCGGC CGCCGAAGAA 
CAAAGCCTGG TGGCCGAAGA AATCCACCGC AACGTCGACG ACATCAACTC GCTGGTCATT 
CAAGTGAGTG CGGGTGCCGA GCAGACCGCC GTGACCAGTC GCGAACTGGC TCGATTGGCG 
GAGCAGCAGC AGGGGTTGGT GGGACGGTTC AGGGTGAGCT GA 

 

Protein sequence

MLRNAPLSIK LLLILMFPLL GFLAFAGIFV ADKSETFGEN SLAVTATNAA QKLSDVVTTL 
QRERGASGVF LGSGGKSMQD KLKTFRQETD KAMGEMRAQS TQDIPGTANV LRALDDVIAL 
RLKVDGLAIN NTESGTRFTD IIKTLIGYNY SLEASIEDPQ ILRALSSLNQ FVDMKERAGR 
ERVLLGLAFN QNRFDAALLS RFSRNLGEFS GYYEAFQRWS PEAFKTRLND VLQQPGSLEV 
ARLQRLGFDT PLGDPLNIKP EDWFNLSTSR IDLMAKVEAE LGQTVVGLAS DARSTAESSL 
YVAIATVIAM LIAVLWLASV IIRNIKIAVV DVNRTLIALS TRDLTARTCY TGKDEFGEIS 
RNLDNMAQQI SEVIGEIGSA TAQVATAAEQ SSSVALQTSQ NVAQQRQGTD QVATAISEMS 
ATVKDVARST TDAAAMSQRV NTSTVQGKAE IENTISLIQG LSLQAEQTSQ IIGELKGESN 
AISSVLDVIR GVADQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLAKK TQESTVSIQN 
MIANLQSGSE RAATSMQETL GKAQAGASSV VRAGELLEEI AEGIASISDR NIQVASAAEE 
QSLVAEEIHR NVDDINSLVI QVSAGAEQTA VTSRELARLA EQQQGLVGRF RVS