| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1963 |
|---|
| Symbol | |
|---|
| ID | 7316352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2082872 |
|---|
| End bp | 2084785 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643616856 |
|---|
| Product | putative methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002514031 |
|---|
| Protein GI | 220935132 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.870205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACA ACCTGAAGAT CAGTGTCCGC CTGCTGGGCG GCATCGCCAT CCTCCTGCTG
CTCACCGTCG GCCTGATCCT GCCGGTGGTG CTCAACAACC TGGGCGGTAT GAGCCAGCGG
GCCGAGGAGC GTCAGCTACA GGACCTGTTC CTGTCCCTGC GCACCGCCAT CGACGCCCAA
TCCCAGCAGG CCGAGGCCAT GGCCGCCTCG GTGAGCAACA TCCCCGAGAT CCAGGCCGCC
TTCGCCGCCC GGGACCGGGA CCGCCTGGCC GAACTCACCG TGCCCATCTT TCAGAACATG
GGTCAGAGCC ACGGCATTGA CCAGTTCCAG TTCCACCTGG CCCCGGCCAC CTCCTACCTG
CGGGTGCACC GCCCTGACCG ACACGGCGAT GACCTGTCGG CGTTCCGCAA CACGGTGGTG
GAGACCAACC GCACCCGGCG CGCCGTGCAG GGCCTGGAGC GCGGCGTCGC GGGCCTGGGC
GTGCGCGGCG TGGTGCCCAT GTTCTACCAG GGCCAGCACA CCGGCTCCGT GGAGTTCGGC
CTGACCTTCG GCCAGTCCTT CTTCGATGAT TTCACCCGTC AGTACGGGGC CGGCGCCGCG
CTGCACATTC CCGGCGATGC CGGTGCCTTC AACCGCTTCG CCAGCTCCAT CGGCGAAGAG
GCGCTGCTCA GCCGCGAGGA ACTGGCCCGT GCCCTGCGCG GCGAGACCGT GCTGCGCCAG
ACGGAGCACC GGGGTACCCC CGTGGCCGTG TACGGCCGGG TGATCAACGA CTTCGCCGGC
CAGCCGGTGG GTGTGCTGGA ACTGATGGTG GATCGCAGCG AGTACGTGGC AGGTTACCGG
GAGGCCCTGT TCTCCGTGCT CGGCGTGGGT CTGCTGGTGT TGGTGCTGGG CATGGGGCTT
GCTTGGGTGA TTGCCCGAGG AATCGTCAAG CCCCTGTGCG AGACCGTGGC GCGCCTGGAC
GACATCGCCC AGGGCGAGGG CGACCTGACT CAGCGCCTGC CGGTGGAGGG CAAGAACGAA
CTCACCCAGC TGGCGGTGGC CTTCAATGCC TTCGTGACCA AGATCCAGGA CGTGGTGCGC
CAGGTGGCGG GTGCCACTTC CCAGCTGGCT GCAGCCTCTG AGGAACTGTC CGCCACCGCG
GAACAGACCA CCAACCAGGT GCGCCGCCAG CAGAACGAGA CCGACCAGGT GGCCACGGCC
ATGAACGAGA TGACCGCCAC GGTGCAGGAA GTGGCGCGCA ACGCCACCGA CGCGGCTGCT
GCCGCCCGGG AGACGGACCA GGAGGCCAGC GCCGGTCGCG ACGTGGTGGG TGCCACCATC
CGCTCCATCG AGTCCCTGGC CTCCGAGGTG GAGAACGCCG CCGGCGTGAT CCAGCGCCTG
TCCGCGGACA GCGAGGAGAT CGGCAAGGTG CTGGACGTGA TCCGCGGCAT CGCTGAACAG
ACCAACCTGC TGGCGCTCAA TGCCGCCATC GAGGCGGCGC GCGCCGGCGA ACAGGGCCGG
GGCTTCGCGG TGGTGGCCGA CGAGGTGCGC ACGCTCGCCT CCCGCACCCA GGAATCCACC
CACACCATCC AGGAGATGAT CGAGCGTCTG CAGGGCAATG CCAGCAGTGC GGTGACCGTG
ATGGAGAAGG GCCGTGTCCA GGCCACTGGT AGCGTCGAAC AGGCCGCCAA GGCGGGTCAG
TCCCTGAAGA GCATCACCGG CGCCGTGGCG CGCATCACCG ACATGAACAC CCAGATCGCC
AGCGCCGCCG AGGAGCAGTC CGCCGTGGCC GAGGAGATCA ACCGTAACGT GGTGAACATC
AGCCAGGCCG TGGACGAAAC CGCCTCCGGC TCCCAGCAGA TCAGCACCGC CAGCGATGAA
CTGGCGCGCC TGGCCGCGGA GCTTCAGGGG ATGGTGGGGC AGTTTAAGGT GTAA
|
|---|
| Protein sequence | MFNNLKISVR LLGGIAILLL LTVGLILPVV LNNLGGMSQR AEERQLQDLF LSLRTAIDAQ
SQQAEAMAAS VSNIPEIQAA FAARDRDRLA ELTVPIFQNM GQSHGIDQFQ FHLAPATSYL
RVHRPDRHGD DLSAFRNTVV ETNRTRRAVQ GLERGVAGLG VRGVVPMFYQ GQHTGSVEFG
LTFGQSFFDD FTRQYGAGAA LHIPGDAGAF NRFASSIGEE ALLSREELAR ALRGETVLRQ
TEHRGTPVAV YGRVINDFAG QPVGVLELMV DRSEYVAGYR EALFSVLGVG LLVLVLGMGL
AWVIARGIVK PLCETVARLD DIAQGEGDLT QRLPVEGKNE LTQLAVAFNA FVTKIQDVVR
QVAGATSQLA AASEELSATA EQTTNQVRRQ QNETDQVATA MNEMTATVQE VARNATDAAA
AARETDQEAS AGRDVVGATI RSIESLASEV ENAAGVIQRL SADSEEIGKV LDVIRGIAEQ
TNLLALNAAI EAARAGEQGR GFAVVADEVR TLASRTQEST HTIQEMIERL QGNASSAVTV
MEKGRVQATG SVEQAAKAGQ SLKSITGAVA RITDMNTQIA SAAEEQSAVA EEINRNVVNI
SQAVDETASG SQQISTASDE LARLAAELQG MVGQFKV
|
|---|
| |