| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0876 |
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| Symbol | |
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| ID | 4923610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 994888 |
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| End bp | 996912 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162409 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001093007 |
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| Protein GI | 127511810 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA ATGTCGCCAC TCGAGTCATC GGTGGATTTA GTGTCGTCAC CTTACTGCTT
ATCGTCTTAG GTGTGGCGTC CTTGGTCACC AACGACAACA TCAAGAGCAG CACCCTCGTT
TTGCAAGACC TGAGCCTTCC CGCCCTAAAG AGCAGCAATG GCCTGACACA GAATCTTGCA
CTGCAAGAAA AGCAGCTACT GGTGGCCTTC CATAGCAAGC AATCCAAAGA ACTGCCTCAG
GTTCGCAGCC AATTCACCAG CCTCAGCAAA GGCTTTATCA CCGAACTGGA TCAACTCAAT
CGTATCATTC AAGGCCACGA GGATAATCTT GGCGGCCAGA TCAAGTCACT CAGGGCCAAC
TACCAGTCGT TCAACGACAA CAGCCTCAAG ATGATGCAGG CCAGAGAGCA GTCGCTGCAG
ACTCAGGAAT CTTTGGTCGA CAACCTGGAA AGTCTCGAAG GCGCCGCCGA TGATACCGCA
TCACTGCTAC TGGACCTTAT CGATCTGGAG ACCAGTCAAG ATCCCACAGA ACGCGAAATT
GCCGCCACCG CCAGCAACAT AGACAACAGC TTCAGCAACC TGATCACCAG CAGCTATGAC
CTGGTCAATG CCAAGGAGAA ATCCAAGTAC GAGACCATAC TCAAGGAGCT GGACTACATC
ATCAGCGAAG CCCAGAACAA ACTGGAATAT GTGAGCCGTC ACTGGGAAGG CGTCATCGAC
CAGGAAGCGC TGGACAATAT CAACACCGAG GCGAGCAAGG TATTCACCAT GCTCAACGGC
CCAGACTCGA TTCTTAAGCG CAAAGGTCAG CAGCTGGATT TCAACCTGCA GGCCAGTCAA
CTGCTAAATA CTGTCGAGTC CAACGCCACC GCCGTCAACC AAAGCATGGG CAGCCTGAAC
AAGGCGATCG AGTCCACCTC TCAGGCCGTT AGCGTCAAGG CGATCGACGA GATCGACAGC
GCCAGCTATA AGACCCTGGC ACTGGTCCTG ATAGCCATCG TCGTGGCGGT GCTGGTGAGT
ATCGCGGTGA TCCGCCCACT CAAGAACTCA CTCGATAAGG TCAACAACGC CCTCAATATC
CTGGCCTCGG GTAACCTGAC CCATAAGCTG GACGACAGCG GCCATGACGA ATTTGCCGAG
CTATCGCGCA ACTGTAACAG GTTAGTAGAC AGCCTGCGTA CCCTTATCCA AGGGATCCTG
GACCGCTCTA ACCAACTGGC TGCTGCCGCC GAAGAAACGT CAGCCATCAC GGCGCAGACC
ACAGCGGGCA TTCAGGAGCA GAAGAACCAG GTCGATCAGG TGGCAACCGC CACCACCCAG
CTCAGCTCAA GCGCCATGCA GGTGAGCACC AGTGCCGATG AGGCCCTGAA CCAGATCCGG
CAAGCCGATG AAGAGGCGCA GCATATGCGT GCCATCGCCG ATGAGAATAA GCGCACCATT
CTGGCGCTGG CCGACGAAGT CGCCAAGGCG GGTCAGGTGA TCAACAAGGT CCACTCCGAC
AGCGCCTCTA TCGGCTCGAT ATTGGATGTG ATCCGAGGCA TCGCCGAGCA GACCAACCTG
CTGGCGCTAA ACGCCGCCAT CGAGGCCGCC AGAGCCGGTG AACAGGGCCG AGGCTTTGCC
GTGGTAGCCG ACGAGGTTCG CAGTCTGGCA TCTCGCACCC AAGACTCGAC CCAAGAGATC
CAGCAGATGA TTCAGGTGCT ACAACAAGGC ACCCAGGAAG CCGTTTCCGT GATGGAGCTG
GGCCGTCAGC AGGCCAATAG CTGCGTCGAG AAGACAGAGC AGGCCAACGT CGCCCTGGAG
AGCATCAGCA ACGCGGTGCA CTATGCCCAT GACTCTGGTA CTCATATTGC CAATGCGGCC
CAGGAGCAGA ACCTGGTGAG CCAGCAGGTG TCTGAGAAGC TAGAGCATAT CGCCGCGATC
TCCGAAGAGA CGGCCACAGG TGCCGATCAG ACGGCACAAT CTAGCCATCA GGTGGCTCAG
CTTGCCGAAG AGCTCCAGGC CTCTGTGGGC GAATTTAAGG TGTAA
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| Protein sequence | MKLNVATRVI GGFSVVTLLL IVLGVASLVT NDNIKSSTLV LQDLSLPALK SSNGLTQNLA
LQEKQLLVAF HSKQSKELPQ VRSQFTSLSK GFITELDQLN RIIQGHEDNL GGQIKSLRAN
YQSFNDNSLK MMQAREQSLQ TQESLVDNLE SLEGAADDTA SLLLDLIDLE TSQDPTEREI
AATASNIDNS FSNLITSSYD LVNAKEKSKY ETILKELDYI ISEAQNKLEY VSRHWEGVID
QEALDNINTE ASKVFTMLNG PDSILKRKGQ QLDFNLQASQ LLNTVESNAT AVNQSMGSLN
KAIESTSQAV SVKAIDEIDS ASYKTLALVL IAIVVAVLVS IAVIRPLKNS LDKVNNALNI
LASGNLTHKL DDSGHDEFAE LSRNCNRLVD SLRTLIQGIL DRSNQLAAAA EETSAITAQT
TAGIQEQKNQ VDQVATATTQ LSSSAMQVST SADEALNQIR QADEEAQHMR AIADENKRTI
LALADEVAKA GQVINKVHSD SASIGSILDV IRGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRSLA SRTQDSTQEI QQMIQVLQQG TQEAVSVMEL GRQQANSCVE KTEQANVALE
SISNAVHYAH DSGTHIANAA QEQNLVSQQV SEKLEHIAAI SEETATGADQ TAQSSHQVAQ
LAEELQASVG EFKV
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