| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4266 |
|---|
| Symbol | |
|---|
| ID | 3717857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4814381 |
|---|
| End bp | 4816021 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_349994 |
|---|
| Protein GI | 77460487 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.261421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGGT TGAATGACGC AAGACTTTCC ACGAAATTGA TCACCGCCTT CGCGGCGTGC
GCCTTCATCA CCCTGGGGGT GGGCCTGCTG GGAAGCCGGG GAGTGACCGA GCTCTCGACA
AGCCTCAGAT CGGTGTTCGG CAACAACCTC GTCGCCGTCG CCAACATCGC GCAGACCAAA
ATCAAGGCTG TCGGACAGAC CCGTGACATG TATCGGCTTT ACGTCGCCAC TGCCGCCAAC
CTGCCACAGA GCACCAAAGA CGAATTCCTC GCCTCGATGA GCGCGAACCA GTTGGCGAGT
GAAAAAGCCT TTGCCGAATA TCGAAAAACC AAGCTTGCCG ACGACGAACG TGCAGCAGGC
GACCGAATGG AAAAAGCCTG GCCCGTTTAC CAGGCGATCG TGCAAAAGTA TCTGGCCCTG
ATGAAGGCCG GCGACCTGGA AAACGGCCGC GAACTGCTGC TCGGCGACCT GCAAAAGAAC
TACCGCGTCG TCATGGACGA ATTGACCATC ATGACCAACT CCAACGATAT GCAAGTCAGC
GAAGCCGCAA AGCGATCGGT TCTGACGGAG TCGTCCGCCA AGACGTCGCT GTACATCGGC
ATCGTGCTGG CCTTCGTCGC TGCGATTTTG CTCGGCCTGT TCATCAGCCG ACTGATCAGC
CGCCCCATCT CAAAAGCCGT TGAAAGCGCC CGAAGCATCG CTGGGGGAGA CCTGACTCAA
AACATCGTCA GCACCGGCCG CGACGAGGCC GGTCAGTTGC TCACGACCCT GGCCGAGATG
CAGGGCAGCC TGAAAGGCAC TATTCAGCAG ATCGCCAACG CGGCAGATCA ACTGGCTTCA
GCTGCCGAAG AACTCACCGC CGTCACCGAC AACGGAAGCC GTGGTCTGAT CCGTCAGAAC
GACGAGATCC AGCAGGCAGC GACCGCTGTC ACGGAAATGA CCTCCGCCGT GGAGGAAGTC
GCGCGCAATG CGGTATCCAC CTCCGAGGCC TCCCAAGCCA CCAGCCGGGA AGCCGGCAAT
GGACGCGATC AAGCGCGAAG CGCCGTCGCC GCGATCAACC ATGCAACCAC GGAAATCGCC
ACCTCCACCA CCATGGTCAA AGACCTGGCG GAGAAGGTTC GAGACATCGG CAAGGTGCTG
GATGTGATCC GGGGGATTGC CGAGCAAACC AATCTGCTGG CGCTTAACGC CGCTATCGAG
GCTGCACGCG CGGGTGAGCA AGGTCGAGGT TTTGCCGTGG TCGCCGACGA GGTACGAGCC
CTGGCGGCAA GAACCCAAGC CTCGACAGGG GAAATCGAAG GTATGATCAA CGACGTTCGC
AACAGTGCAG ACGAAGCCGT TGGCGCCATG GGGAAAAGCC AGGCGCTGGT CAGCGAAACC
CAGTCACTGG CGCAAGCGAC CGGCCAGGCA TTGGAGCTGA TTGCCGACGG CATCTCGCAG
ATCAACGATC GCAACCTCGT CATCGCCACT GCTTCGGAAG AACAGGCACA CGTCGCTCGC
GAAGTGGATC GTAATCTGGT CAACATCCAG GATCTGTCCA CCCAAACGGC GGCAGGTGCG
CATCAGACCA GCGCCTCGAC CCAGGAACTT TCCAACCTGG CGGCGTCGTT CAACACCATG
GTCAGTCGCT TCCGCTTATA A
|
|---|
| Protein sequence | MSWLNDARLS TKLITAFAAC AFITLGVGLL GSRGVTELST SLRSVFGNNL VAVANIAQTK
IKAVGQTRDM YRLYVATAAN LPQSTKDEFL ASMSANQLAS EKAFAEYRKT KLADDERAAG
DRMEKAWPVY QAIVQKYLAL MKAGDLENGR ELLLGDLQKN YRVVMDELTI MTNSNDMQVS
EAAKRSVLTE SSAKTSLYIG IVLAFVAAIL LGLFISRLIS RPISKAVESA RSIAGGDLTQ
NIVSTGRDEA GQLLTTLAEM QGSLKGTIQQ IANAADQLAS AAEELTAVTD NGSRGLIRQN
DEIQQAATAV TEMTSAVEEV ARNAVSTSEA SQATSREAGN GRDQARSAVA AINHATTEIA
TSTTMVKDLA EKVRDIGKVL DVIRGIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRA
LAARTQASTG EIEGMINDVR NSADEAVGAM GKSQALVSET QSLAQATGQA LELIADGISQ
INDRNLVIAT ASEEQAHVAR EVDRNLVNIQ DLSTQTAAGA HQTSASTQEL SNLAASFNTM
VSRFRL
|
|---|
| |