More than 300 homologs were found in PanDaTox collection
for query gene Swoo_2282 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
664 aa  746    Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  57.98 
 
 
664 aa  749    Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  56.78 
 
 
664 aa  746    Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  63.9 
 
 
662 aa  868    Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  58.73 
 
 
664 aa  760    Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  54.27 
 
 
666 aa  693    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  56.02 
 
 
664 aa  731    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  74.7 
 
 
664 aa  1018    Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  58.89 
 
 
664 aa  764    Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
664 aa  748    Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  100 
 
 
664 aa  1353    Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  51.96 
 
 
668 aa  674    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  58.43 
 
 
664 aa  756    Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  59.13 
 
 
531 aa  619  1e-176  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  36.24 
 
 
662 aa  327  6e-88  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  34.58 
 
 
661 aa  283  8.000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  32.52 
 
 
653 aa  263  8.999999999999999e-69  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  29.92 
 
 
661 aa  256  8e-67  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  32.59 
 
 
661 aa  251  2e-65  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  30.77 
 
 
653 aa  247  4.9999999999999997e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
658 aa  244  3e-63  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  31.3 
 
 
605 aa  244  5e-63  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
720 aa  234  6e-60  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  31 
 
 
653 aa  226  1e-57  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.06 
 
 
638 aa  226  1e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
543 aa  223  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  46.35 
 
 
637 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
552 aa  219  1e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  29.64 
 
 
720 aa  218  2e-55  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  28.66 
 
 
672 aa  218  2.9999999999999998e-55  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  36.56 
 
 
620 aa  218  4e-55  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  35.59 
 
 
548 aa  218  4e-55  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  42.35 
 
 
679 aa  217  7e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
572 aa  216  8e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  38.68 
 
 
548 aa  216  9.999999999999999e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
716 aa  215  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
568 aa  214  2.9999999999999995e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
552 aa  213  7.999999999999999e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
573 aa  213  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
620 aa  211  2e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  41.94 
 
 
545 aa  211  3e-53  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.81 
 
 
713 aa  211  5e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.81 
 
 
523 aa  210  6e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
541 aa  210  7e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  38.62 
 
 
712 aa  210  8e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
620 aa  210  8e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  27.99 
 
 
653 aa  209  1e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
541 aa  208  3e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
634 aa  208  3e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
573 aa  207  5e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  25.97 
 
 
646 aa  207  5e-52  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
541 aa  207  5e-52  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
540 aa  206  1e-51  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  27.17 
 
 
646 aa  206  1e-51  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.91 
 
 
712 aa  206  1e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  43.69 
 
 
411 aa  205  2e-51  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
492 aa  205  2e-51  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
630 aa  206  2e-51  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  29.38 
 
 
700 aa  205  2e-51  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
637 aa  205  2e-51  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
634 aa  205  3e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  39.94 
 
 
546 aa  205  3e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
620 aa  205  3e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  43.71 
 
 
561 aa  205  3e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
645 aa  204  4e-51  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
636 aa  204  5e-51  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
645 aa  204  5e-51  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
554 aa  204  5e-51  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  42.47 
 
 
619 aa  204  6e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
640 aa  204  6e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.71 
 
 
620 aa  204  6e-51  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  42.47 
 
 
633 aa  203  7e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  43.71 
 
 
561 aa  203  7e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.86 
 
 
647 aa  203  8e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
541 aa  203  9e-51  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
645 aa  202  9.999999999999999e-51  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
645 aa  202  9.999999999999999e-51  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  40.71 
 
 
568 aa  202  1.9999999999999998e-50  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.98 
 
 
634 aa  202  1.9999999999999998e-50  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  38.99 
 
 
493 aa  202  1.9999999999999998e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
492 aa  201  3e-50  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  37.43 
 
 
542 aa  201  3e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  36.29 
 
 
497 aa  201  3e-50  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
492 aa  201  3e-50  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  40.06 
 
 
545 aa  201  3e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
620 aa  201  5e-50  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
620 aa  201  5e-50  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  39.27 
 
 
645 aa  201  5e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
626 aa  201  5e-50  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2059  histidine kinase, HAMP region: chemotaxis sensory transducer  35.46 
 
 
491 aa  200  6e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.116428  normal  0.539616 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  38.81 
 
 
570 aa  200  6e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
560 aa  200  6e-50  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.57 
 
 
624 aa  200  7e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0982  methyl-accepting chemotaxis sensory transducer  28.02 
 
 
663 aa  200  7e-50  Marinomonas sp. MWYL1  Bacteria  normal  0.293812  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  36.73 
 
 
554 aa  199  1.0000000000000001e-49  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2254  methyl-accepting chemotaxis protein  39.44 
 
 
491 aa  199  1.0000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.177753  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
554 aa  199  1.0000000000000001e-49  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.59 
 
 
559 aa  199  1.0000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
554 aa  199  1.0000000000000001e-49  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  38 
 
 
554 aa  199  1.0000000000000001e-49  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
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