Gene Pfl01_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4022 
Symbol 
ID3713931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4546814 
End bp4548295 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content64% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_349750 
Protein GI77460243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCCT GGCTTAGCAA TATCTCGCTG AAATACAAAT TCTGGGCGGT CAACGCGGTC 
GCCTTTGTCA CCACCCTGTT GCTGGTGCTG TACGCCGTGC AGCTCGAACA ACAGGCCCGC
AGCCACGCCG CGCAAACCTC GGCCCAGGCC CAGGCGCAAT TGCTCAAGGC CTGGCCGGTC
GGGCAGGCGC TGCCCAAATC CGATCAGGTA CTGACGTTTA AACGCGGTGA AGCGCCGCGC
CTCAACGATC AACCGCTGCT GGAGATAACC GACAGCAGCG GCTGGATCGA GATCAGTCAT
TTGCCGTTGT TCGGCGAAAA TCCGCTGCTC GGCGCCGAAG TCTTCAGCCG TGCCGATGGC
CAGCAGGTCG CCGTGATCGC CTACGCCCCC AGCCTCAGCC AGGTGTTCAG CGAGCGCTTC
GCCAACTACG CGGTGGCGGT GTTCATCCTG ATGCTGGCGA TGCTCGGTGC CTCGCAGCTA
CTGATCCGCT TTCTGCTCAG CCAGCTCAAT ACGCTCAAGG ACGTGATGCT GCACGTGGAG
AAAACCGGCG ACCTCGCCGC CCGGGTGCCG CTGGCCTGCA AGGACGAAGT CGGGCAAATG
GCCAACGCGT TCAATGCGAT GCAGGCCGGT TATCAGCGAG TGGTGACCAC CGTGGCCAAC
ACCGCGCGGC AACTCGACGT CGGCGCTGCG CGACTGGCGT CGAGCATGAA CGAGGTGCGT
CACGGCATGC TTGGCCAGCA GAGTGAAACC GATCAGGCCG CCACGGCGAT CAACGAAATG
ACCGCGACTG TCTACCACAT CGCCCAGCAC GCCGGCGCCA CTCGCGATCT GTCGCAGACC
GCCGACGGCC TGGCCGGCAG CGGCCAGCAA GTGGTGAGCC GGGTGCAGAC GTCGATTGCC
GGCCTGTCCA GCGGCGTGCA GCAGACTGCC GAGATGATCC AGCGTCTGGC CGAGGACAGC
CAGAAGATCA ACGGCGTGGT CAGCGTGATC CACAGCATCG CCGAACAGAC CAATTTGCTG
GCACTCAATG CCGCCATCGA AGCGGCCCGT GCCGGGGAAA TGGGTCGCGG GTTTGCGGTG
GTCGCCGACG AGGTGCGCAA CCTCGCAAAA CGCGTGCAGA CCTCCACCGA TGAAATCACC
ACCATGGTCT CGGCGTTGCA GGCCGGCACC CGCGACGCGG TGGACTTCAT GCAGGAGAGT
TCGTACAAGG CCGATGACTG CGTGCAGCAG GCGCAAGAAG CCGGCGAAGC GCTGGCGGAA
ATCACCGGGG CGGTAGCGCA GATGCGCGAG AGCAACACGC AGATTGCGGT GGCGGCGGAG
CAGCAAAGTC AGGTGGCCGA AGAGATGAAC CGCGCGGTGG TGAGCATTCG CGACGTGACC
GAAAACACTG TGCAACAGAC CGTGGATTCG GCGACCACGA GCAATGAACT GGCGACGCTA
GCCGGGGAGC TGAACAAGGC GATCGGTCAG TTGAAGCTCT AG
 
Protein sequence
MGAWLSNISL KYKFWAVNAV AFVTTLLLVL YAVQLEQQAR SHAAQTSAQA QAQLLKAWPV 
GQALPKSDQV LTFKRGEAPR LNDQPLLEIT DSSGWIEISH LPLFGENPLL GAEVFSRADG
QQVAVIAYAP SLSQVFSERF ANYAVAVFIL MLAMLGASQL LIRFLLSQLN TLKDVMLHVE
KTGDLAARVP LACKDEVGQM ANAFNAMQAG YQRVVTTVAN TARQLDVGAA RLASSMNEVR
HGMLGQQSET DQAATAINEM TATVYHIAQH AGATRDLSQT ADGLAGSGQQ VVSRVQTSIA
GLSSGVQQTA EMIQRLAEDS QKINGVVSVI HSIAEQTNLL ALNAAIEAAR AGEMGRGFAV
VADEVRNLAK RVQTSTDEIT TMVSALQAGT RDAVDFMQES SYKADDCVQQ AQEAGEALAE
ITGAVAQMRE SNTQIAVAAE QQSQVAEEMN RAVVSIRDVT ENTVQQTVDS ATTSNELATL
AGELNKAIGQ LKL