| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1091 |
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| Symbol | |
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| ID | 4017374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1250909 |
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| End bp | 1252771 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955083 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_562102 |
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| Protein GI | 91792451 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0174472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATAC GCTCAAAATT AATGCTCAGT GCCGCCGTAT CAATTGGCGC ATTAATTGCC
ATGTTTGCTT TGCAGCAATA TTCAAACAGT CAACAGGCTC AGCTCACTTC AGCAGAACTC
AATGTCAGCG AAATCGATCT TAAAGTACTC AATTTACGTA AAGAAGAGAA AGATTTTCTG
TCCCGACTTG ACATGGCTCA TGTGGAGAAA CACCAAAAGC ATGTGTTAGA AATTAAGCAA
TTGGCGCAAG ACATTACCAA GGCATTGAAC GCTCATGATA TCCCAATAAC GGCGTTGTCC
AGCTTATTAA CCAGCGTGGG TCATTACCAA AGCATTTTTG CTGAAATCGT GGCCTTACAG
TCTGAAATTG GTCTCACGCC AAAATCTGGG CTCTACGGTA ACTTAAGGGA TAAAGTTCAC
GAGATAGAGC AAATTTTAGA CACCGCAGAT CAAGAGCGAT TAACTGTGAT CATGTTGCAG
TTAAGGCGCA ATGAAAAAGA CTTTATGTTG CGAAGAGACT TAGGCTATGT GGATAAATTC
AACACTAACG TCAGCCTATT TAAAACAGCC GCATCTTTAT CCAGCTTAGA CAGTGGCCGT
GTTGCTCAAT TAACCAGTCT GATGGATAAA TATCAGCAAG CCTTTATTAT CCTTACGGAA
AAAGAGCGTC AGTTTGGTAT GACGCCAAAT GATGGCAAGA TGGCGGTACT GCGCGATGCT
ATCCATCAAA CTGAAGCCGA TATCGATGCG CTGCAATCCC AGACAAAAAG TGCCATTAAG
GATGCTGGAG AAAGGGGATT TCTGTTTGGG GTTGCTATCT TCATTCTCAT TGCAGCGGCC
TTGTCAGTGG CAACGTATTT GATTATCCGC AGCATTATCG ACCCAGTTGA TAAAATTACC
AACATTATTA GTCAAATAGA AAAAACTAAA GATTTGACCC TGAGATGTGA TGCTTCAAGC
GATGATGAAT TAGCGCGTAT TGCACTGCAT TTTAATCATA TGGTGGAGAG TTTTCAGAAA
TTAATTGAAC AGGTTAATGA GTCTGTCTCA GCCATGAACC AGTCCTGTAA TGAATTGTCT
GTCAATGCAT CAGCCGCGTC TAAGGGCATG GCCAAGCAGC TCAACGAGAC AGACATGGTG
GCCACGGCAA TTACCGAAAT GGGCTCCACC ATTGATGAAA TTGCCAATAA TACTGAGCTT
GCGGCAGCCA AAGCCAGTCA AACTCATGAA AATGCCCAGA GTGGCCTGCA GAGCGTCGAG
CAAACCATAA GTAAAATTCA GCAATTGTCG GCACAGCTTA ATGATTCATC TCGAGTGGTA
TCGGAACTCG AGCAAGACAG TAAGACTATA GGCAGTGTGC TCGATGTTAT TCGTGGCATC
GCCGAACAGA CCAATTTGCT GGCTTTAAAT GCTGCCATTG AAGCGGCAAG GGCAGGCGAG
CAAGGCCGCG GGTTTGCTGT GGTCGCCGAC GAGGTGAGAA ATCTCGCGAT GCGCACTCAA
TCGTCCACGG CGCAGATTTC CGCCATCACC CAAACCTTGC AGACTCGTAC TCGCTCAATT
GTGCAGTTAA TGGAAGTGAG TCAGCAGCAG GGCAGTGACA GTGCAGAGCA AGCCGCCGGT
GCTGGCCGTC TACTAAAGCA GATAAACGAT GATGTCACCA ACATCATGGA CATGAGCACT
CAGATAGCGG CGGCCATTGA GGAGCAAAGC ATGGTGTCAG CCGAAGTGAA TAAGAACGTG
GTAGTTATTC GGGATATTGC CGATGATTCC TCGCAAACGG CGGCTAAGAA TGCAGCCTCT
TCAGAAGATG TCAGACAAAG AGCGGCTAGC CTAAGTGCTG CTGTGAGCAA GTTCAAAGTG
TGA
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| Protein sequence | MLIRSKLMLS AAVSIGALIA MFALQQYSNS QQAQLTSAEL NVSEIDLKVL NLRKEEKDFL
SRLDMAHVEK HQKHVLEIKQ LAQDITKALN AHDIPITALS SLLTSVGHYQ SIFAEIVALQ
SEIGLTPKSG LYGNLRDKVH EIEQILDTAD QERLTVIMLQ LRRNEKDFML RRDLGYVDKF
NTNVSLFKTA ASLSSLDSGR VAQLTSLMDK YQQAFIILTE KERQFGMTPN DGKMAVLRDA
IHQTEADIDA LQSQTKSAIK DAGERGFLFG VAIFILIAAA LSVATYLIIR SIIDPVDKIT
NIISQIEKTK DLTLRCDASS DDELARIALH FNHMVESFQK LIEQVNESVS AMNQSCNELS
VNASAASKGM AKQLNETDMV ATAITEMGST IDEIANNTEL AAAKASQTHE NAQSGLQSVE
QTISKIQQLS AQLNDSSRVV SELEQDSKTI GSVLDVIRGI AEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRNLAMRTQ SSTAQISAIT QTLQTRTRSI VQLMEVSQQQ GSDSAEQAAG
AGRLLKQIND DVTNIMDMST QIAAAIEEQS MVSAEVNKNV VVIRDIADDS SQTAAKNAAS
SEDVRQRAAS LSAAVSKFKV
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