Gene Sdel_0377 details

Gene Information

• Locus tag: Sdel_0377
• ID: 8591900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 361408
• End bp: 363393
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 41%
• Product: Nitrate and nitrite sensing domain protein
• Protein accession: YP_003303449
• Protein GI: 268679018

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000413313
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGAA CCATAAAATT TCAATTAGGT CTAGTGTGTT GTGTTGTGGT GCTTTTTGCG 
CTTGTTTTAG GATTTAAAAC CCTTATGGAG GGCAGAGAAA AACTTCGAAA TGTTGATGAC 
CTTCAAGCCA TGGTGACTCT CTCAAGTAGT ATTAGTCTTT TGGTACATGA AAGCCAAAAA 
GAGAGAGGTG CAAGTGCTGG ATTTATTGGT TCAAAAGGTC AAAAATTTAG TGATAAAGTT 
CCTCCACAGC GAAAACTCAC CGATAAAGAG CATCAGCGCT ACAAAACAGC TCTTCAATCC 
ATTGCACTAG AGCGCTATCC TCAAACACTT AAAGACAAAA TAGCGACGAT TGAAAGTTTT 
TTGCAAAAAC TGCCTTCCAT TAGAAGTCGT GTGGATGCTC TTAGTATCAG CGTTGCAGAA 
GAGGTAGAGT ATTACACTTT GCTCAATCAA CATCTTTTGG ATATTGTTGC ATCCACTGCC 
GTTCTTTCTG GAGAACCAGA AATTGTCAAG CAACTCAGTG CGTATGCGAA CTTTCTAAAA 
TCCAAAGAGC GCTCAGGCAT TGAGCGAGCT GTCCTCTCCA ACACCTTTGC TGCCGATAAA 
TTTGCCCCCA ATATGTTCGT TAAACTGATT ACGCTCATTT CAGAACAAAC CTCTTATATT 
GATGCATTTT TCAGTACCGC TTCCCCTAAA TCTATCGCGT TTTATAACCA AACGATGCAA 
TCGCCTATCG TCCAAGAGGT TGAAAAAATG CGCAATGTCG CCATTGAAAA AGCAACCACG 
GGTAGTTTTG GAGTCGATGC GACCCATTGG TTTGATACGA TTACAAAAAA AATAAATCTT 
CTTAAAGAGG TGGATGACGC CCTTGCAAAT GAAAATTTAG AAACCCTCCA GTCCCTTGAG 
AAGGCGACAA AAAAACAGAT GATGATTGAA AGTTCTGGAT TGATTATTGT CACATTTTTG 
ATTCTTGTTT TATTGTACAC GACCATTAAA GATATTCTCC AAGCCATTAC CCTCTCAGGG 
CAAAAGCTCT CACACGTCTC CTCCACGCTG GATTTAACCT ATCCGCTTCT GCTCAAAAGT 
GATAACGAAA TCTCCGATAC GATGCAAGAA GCACAAAAAC TGATTCATAA TTTTAAAGAC 
TCTATCGCCA AAGCGTTTGA GACATCCAAC GATAGTGTAA AAGCGAGTAG CTCCCTTAGT 
GATGTTGCTT CCAACCTTGC CAACAACATT ACCGAACAAA ACAGATTTAT TCATGGCATT 
CAAGAAGAGA TGCGTCTTCT TCTTGAAAAA GAGCATGAAA TGCAAAACAT GTCTTTTAAA 
ACTTTAGACG ATTTAGAGCA AACCAAAGCG GTACTTGAAA CTTTTGTCAC GAGTATGAGT 
AGGGTTGTTG AAATGATTTC GATTGGCGCT CAAAAACAGC ACGAATTAGG GAGTAAAGCC 
AACTCCCTTG CCCAACAAGC AACCGATATT AAAAATGTGT TGGCTATTAT CGGGGATATT 
GCGGATCAAA CCAATCTCTT AGCGCTCAAT GCGGCGATTG AAGCGGCACG TGCGGGGGAA 
CATGGACGTG GCTTTGCCGT GGTTGCCGAT GAAGTGAGAA AACTAGCAGA ACGTACCCAA 
ACTTCTTTGA GCGATATTAG CACCACCACC AATGTGATTG TGCAAACCAT TCATGAGGTA 
ACAGGCGAAA CGGAACATAT TTCACAGTCA TTTTACCAAC TTTCCAAAGA GACCAACACG 
CTCATTGAAC AGTCTCAACA CACCTCTCAA ACCCTAAGCA ACACCATTCA CATCTCCAAT 
GAACAGAGTA CAAAGCATAC CGATGTCGAA AAAACTGTGG AACTCTTTAT GAAACATATC 
AATGAAGTCA CGACGTTATC GGAGAAAAAC AACACGTTAG GTGAAACGGT TAAAGAGATT 
TCCGCTAATC TCTCTTCTAA AGCAGAAAGT GCCAATGTGG AACTTAAACG CTTTCGTATT 
GAATAG 

 

Protein sequence

MRRTIKFQLG LVCCVVVLFA LVLGFKTLME GREKLRNVDD LQAMVTLSSS ISLLVHESQK 
ERGASAGFIG SKGQKFSDKV PPQRKLTDKE HQRYKTALQS IALERYPQTL KDKIATIESF 
LQKLPSIRSR VDALSISVAE EVEYYTLLNQ HLLDIVASTA VLSGEPEIVK QLSAYANFLK 
SKERSGIERA VLSNTFAADK FAPNMFVKLI TLISEQTSYI DAFFSTASPK SIAFYNQTMQ 
SPIVQEVEKM RNVAIEKATT GSFGVDATHW FDTITKKINL LKEVDDALAN ENLETLQSLE 
KATKKQMMIE SSGLIIVTFL ILVLLYTTIK DILQAITLSG QKLSHVSSTL DLTYPLLLKS 
DNEISDTMQE AQKLIHNFKD SIAKAFETSN DSVKASSSLS DVASNLANNI TEQNRFIHGI 
QEEMRLLLEK EHEMQNMSFK TLDDLEQTKA VLETFVTSMS RVVEMISIGA QKQHELGSKA 
NSLAQQATDI KNVLAIIGDI ADQTNLLALN AAIEAARAGE HGRGFAVVAD EVRKLAERTQ 
TSLSDISTTT NVIVQTIHEV TGETEHISQS FYQLSKETNT LIEQSQHTSQ TLSNTIHISN 
EQSTKHTDVE KTVELFMKHI NEVTTLSEKN NTLGETVKEI SANLSSKAES ANVELKRFRI 
E