Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1685 |
Symbol | |
ID | 4252261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1997345 |
End bp | 1999339 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118297 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_733818 |
Protein GI | 113970025 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0832618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.158688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGC AATGGATTGG CAACCTCAGC TTGAAACAAA AATTACTCAT GGTTGTATTG CCGCCCTTAT TTGCATGTTT TTTATATGGT GCTTTGTTTC TCATTGAAAA ATATGAGTAT CGTCAAGAGC TTAAGCTTAT CGTCCAATTG AGTGAATTGG CGGTCACCAA CAGTAATCTG GTGCATGAGC TACAAAAAGA GCGTGGCATG AGCGCAGGCT TTATTGGCTC AGCGGGTAAA GCCTTTGCAG GCAAAATCCC AAGTCAAAGA CAACTGACGG ATAGCCAGTT AAAACAATTC CAAGATTTCA TTTCAAACAA TGCGTTACCC GAAGTGTTTG CGCCTAAATT ACGGGAGATC AACACTCAGC TTGGTCGCCT TTCTGGGATC CGTTCGCAAA TCGACAGTTT ATCCATCAGT GTGGCCGATG AAGTGGCCTA TTACACCGAT CTCAATAAAC AGTTATTGGC CATCGTCGAT GAAACGGCAA AGGCTGGCGC CAACCAAGAA ATTGCCATTA AGGCCGCGGC ATTCAGTGCC TATCTGCAAA TGAAGGAACG GGCGGGGATT GAGCGTGCGG TCTTAAGTTC AACCTTCGGC CAAGCAGGTT TCAAACCTAA GGTATATGCC AAGTTTATAA CCTTAGTCTC TGAGCAAAAT ACTTATCTGG AGCGCTTCTT GGCACTTGCC ACGCCCAATC TCGTCGAGGG TATTCGTCAG CTGCAAAATG GTAACGAAGT CAGTGAAGTT GAGGCGCTGA GACAAATAGC AATCGACCAA GATAATCAAA AAATTCAGCA ACAAAACCCG GAGGATTGGT TTGCGAAATC CACGGCACGT ATCGACCGTT TACGGGATTT TGAGCAAGAG GTTTCTACCG ATCTGGTTAA GACCACCACA GACCGACTCT ATACCGCCAA CGAGCATATG TTCTTCGTGC TCGTGACATT AACCGTGGTG TTAGTGTTAG TGCTGCTGTT GAGTTTATCG GTTATCCGTT ACCTACACGA CAGTGTGCAC CATGTGTATT CGACGGTGAC AAAGGCCAGG AAACATTATG ATCTCAGTGT GCGTTTAACC CAAAATAGCT CGGATGAATT TGGGGAGTTA GCCATTGCAT TCAACGACAT GATGAATGAT TTCGAGAGTG TGATCCTGCA AGTGCGTGCC AGTGCCAGCA AGTTACAACA AGCGGTAGAG CAAATGGATG TGTGTACCCA CGCAATGGAG CAAGATGTGA TGGCAGGGCA CAGTGAGGCC GAACAAGTGG CCTCGGCAAT GACGGAGATG AGTGCGACGG TGGCAGAAAT CGCCAGTAAC GCCGTTAATG CATCGGAAGC CTCCACCGCG GCGAATCATG AGGCAAAAGC GGGTAATATC GAAGTGGGTC GTACCAGTGC CGCCATTAAG GCTTTAGCCG ATGATATTGA TGGCGCCTCT AAGGCCATTA ATGAACTCGA CCGTGAAATC CACGGTATTG TGGTGGTACT CGATGTGATA AGCGGCATTG CCGAACAAAC GAATCTACTT GCACTTAATG CGGCGATTGA AGCGGCAAGG GCAGGCGAGA TGGGACGGGG CTTTGCCGTC GTGGCCGATG AAGTGAGAAG TCTTGCGCAG CGCTCACAAA CCTCGACCTC CGATATTAAG AACATGACGG ATAGACTGAA ATCGGGCGCC AGCATTGCCG TTAAAGCCAT GGAACGCGGA CTCGCACAGG CCAATAACAG CGTGCACGAA GCCGAGCAGG CGGGGATTGA GCTTAAACGT ATCGTCGAGC AAGTGGATAT TATCGACCGC ATGAATGAGC AAATTGCCAC GGCAACCCAT GAACAGTCTG CCGTGTCTGA GGATGTGAAT CGCAATGCAT TGAAGATCAG TGAAATTTAT CTCAATACCC AGAGGATTTC GGATGAATTA CGGGAATTGA CCAAGGCACT GACCTACGAT GCGGCGCTAA TGTCCAAGGA AGTGAACAAG TTCAACGTCA ATTAA
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Protein sequence | MKWQWIGNLS LKQKLLMVVL PPLFACFLYG ALFLIEKYEY RQELKLIVQL SELAVTNSNL VHELQKERGM SAGFIGSAGK AFAGKIPSQR QLTDSQLKQF QDFISNNALP EVFAPKLREI NTQLGRLSGI RSQIDSLSIS VADEVAYYTD LNKQLLAIVD ETAKAGANQE IAIKAAAFSA YLQMKERAGI ERAVLSSTFG QAGFKPKVYA KFITLVSEQN TYLERFLALA TPNLVEGIRQ LQNGNEVSEV EALRQIAIDQ DNQKIQQQNP EDWFAKSTAR IDRLRDFEQE VSTDLVKTTT DRLYTANEHM FFVLVTLTVV LVLVLLLSLS VIRYLHDSVH HVYSTVTKAR KHYDLSVRLT QNSSDEFGEL AIAFNDMMND FESVILQVRA SASKLQQAVE QMDVCTHAME QDVMAGHSEA EQVASAMTEM SATVAEIASN AVNASEASTA ANHEAKAGNI EVGRTSAAIK ALADDIDGAS KAINELDREI HGIVVVLDVI SGIAEQTNLL ALNAAIEAAR AGEMGRGFAV VADEVRSLAQ RSQTSTSDIK NMTDRLKSGA SIAVKAMERG LAQANNSVHE AEQAGIELKR IVEQVDIIDR MNEQIATATH EQSAVSEDVN RNALKISEIY LNTQRISDEL RELTKALTYD AALMSKEVNK FNVN
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