More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_1685 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  84.64 
 
 
664 aa  1126    Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  84.94 
 
 
664 aa  1133    Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  57.34 
 
 
662 aa  736    Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  56.02 
 
 
666 aa  728    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  84.37 
 
 
531 aa  902    Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  58.73 
 
 
664 aa  758    Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  60.24 
 
 
664 aa  791    Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  85.24 
 
 
664 aa  1135    Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  100 
 
 
664 aa  1354    Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  98.19 
 
 
664 aa  1333    Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  87.65 
 
 
664 aa  1174    Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  52.04 
 
 
668 aa  674    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  57.53 
 
 
664 aa  737    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  97.44 
 
 
664 aa  1285    Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  37.88 
 
 
662 aa  349  7e-95  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  35.9 
 
 
661 aa  310  4e-83  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  33.33 
 
 
653 aa  295  2e-78  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  33 
 
 
653 aa  276  1.0000000000000001e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  29.62 
 
 
661 aa  267  5e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  33.51 
 
 
661 aa  261  3e-68  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
653 aa  257  4e-67  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
720 aa  255  2.0000000000000002e-66  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
605 aa  253  6e-66  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  30.15 
 
 
720 aa  240  5.999999999999999e-62  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  30.53 
 
 
672 aa  240  6.999999999999999e-62  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
541 aa  224  3e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
658 aa  220  5e-56  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.4 
 
 
637 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  37.5 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009654  Mmwyl1_0982  methyl-accepting chemotaxis sensory transducer  28.81 
 
 
663 aa  217  4e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.293812  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
568 aa  216  9.999999999999999e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
646 aa  215  1.9999999999999998e-54  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
541 aa  214  3.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.43 
 
 
523 aa  214  3.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  38.82 
 
 
543 aa  213  1e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40 
 
 
712 aa  212  2e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
645 aa  211  3e-53  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40 
 
 
712 aa  211  3e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
638 aa  211  3e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
636 aa  211  3e-53  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  43.03 
 
 
679 aa  211  5e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
645 aa  210  6e-53  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  37.56 
 
 
634 aa  210  6e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
645 aa  210  6e-53  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  43.51 
 
 
552 aa  210  8e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.33 
 
 
541 aa  209  9e-53  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
541 aa  209  1e-52  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
634 aa  209  2e-52  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
716 aa  208  2e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.72 
 
 
645 aa  209  2e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
645 aa  207  5e-52  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
573 aa  207  6e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  29.62 
 
 
653 aa  206  8e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  36.78 
 
 
548 aa  206  8e-52  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  45.7 
 
 
634 aa  206  9e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  38.6 
 
 
545 aa  206  1e-51  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  28.23 
 
 
646 aa  205  2e-51  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.72 
 
 
620 aa  206  2e-51  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  38.31 
 
 
620 aa  205  2e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
643 aa  205  2e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.98 
 
 
624 aa  204  4e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  37.68 
 
 
545 aa  204  6e-51  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  42.67 
 
 
552 aa  203  8e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
572 aa  202  1.9999999999999998e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  40.7 
 
 
548 aa  202  1.9999999999999998e-50  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
542 aa  201  1.9999999999999998e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
639 aa  201  5e-50  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  38.74 
 
 
596 aa  201  5e-50  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  45.26 
 
 
561 aa  200  6e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
540 aa  199  1.0000000000000001e-49  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  37.09 
 
 
630 aa  199  1.0000000000000001e-49  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
541 aa  198  2.0000000000000003e-49  Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
411 aa  198  2.0000000000000003e-49  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
541 aa  199  2.0000000000000003e-49  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  38.16 
 
 
541 aa  199  2.0000000000000003e-49  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
541 aa  199  2.0000000000000003e-49  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.24 
 
 
713 aa  199  2.0000000000000003e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
637 aa  199  2.0000000000000003e-49  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.16 
 
 
558 aa  198  3e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
541 aa  197  3e-49  Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
554 aa  198  3e-49  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
533 aa  198  3e-49  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.91 
 
 
559 aa  197  4.0000000000000005e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.94 
 
 
533 aa  197  4.0000000000000005e-49  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
541 aa  197  5.000000000000001e-49  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  38.79 
 
 
620 aa  197  5.000000000000001e-49  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
541 aa  197  5.000000000000001e-49  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_011312  VSAL_I0920  nitrate and nitrite sensing methyl-accepting chemotaxis protein  26.51 
 
 
662 aa  197  5.000000000000001e-49  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
620 aa  197  6e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.18 
 
 
640 aa  197  6e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
620 aa  197  6e-49  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
622 aa  197  7e-49  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
524 aa  197  7e-49  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
620 aa  197  7e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
620 aa  196  8.000000000000001e-49  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  40.26 
 
 
560 aa  196  8.000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  37.43 
 
 
541 aa  196  8.000000000000001e-49  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
554 aa  196  8.000000000000001e-49  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  44.89 
 
 
561 aa  196  8.000000000000001e-49  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
620 aa  196  8.000000000000001e-49  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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